Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02019 ATGGCGAACCCAGAAGCAAAGCTCGATACTTTCTTGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAATATCAAGTACTGTGATTCCAGAAAAGGGTTTGGCATCTTCTCTGATAAAGATGTTTCTGATGGGATTTTGTTGGTAGTTCCACTAGAGTTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTTTTCTAGGACCAGAATGTAGAGCATTGTTTGAAGAAGGAGATGTAGATGACAGGCTCTTAATGATGTTGTTATTGACGGTGGAGCGTTTGCGTAAGGGTTCTCTATGGAAGCCGTACCTTGATATGCTTCCAACCACTTTTCGAAATACACTTTGGTTTAGTGAAGAGGAACTTCAAGAGCTAAGAGGAACAACATTATATCGTGCAACTGAATTACAAAAGAAAAGCCTGTTGAATTTGTATGAAACTAAAGTGAAGGATTTAGTGAAGAAACTTTGGACTGACGGAAATTTGGAGATTGAGGTGTGCTTTGAAGATTTTCTTTGGGCAAATTCAGTATTTTGGAGCCGCGCTTTGAACATTCCATTGCCGCGTTCTTATGTATTTCCTGAGATGCAAAATGTTCATCAGAGTTGCACTCCAGAAGCTGATGAAAAAGGAAGCCAGGTTATAAAATCTGACGATCTAACTAAGGAAACAACACATAGCACAGTGCAAGGAGACACTGTTTGGGTTGAGGGTCTTGTCCCTGGCATTGATTTTTGCAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACCGGCATAACGACAGGAGTTCCTGTCTCTATGTATCTTCTTTCAGCTGCTCAAAGTCCCTTGCAGATTGATCGAGAAATTTCCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGATGGTAACAAAGATGACTACCTCATGGTCCATTATCCTACAGAAGCAATAAATACTATTTCTTTTTCAGAGTCTAAAAGCCAGCTTCTTGAAGTTCAGAATGCTGAAATGAGATGTCTTTTACCCAAAACTCTGCTGGATAATGGATTTTTTCCATTAGGCACCGAAAAAAGCGGAGAAAATAAAAAGTGCAACAATGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAAATTCCATCTTATGTAAACAAGCTTGTTTTTCCTGAAAAATTTATGGCTACCTTGAGGACCATAGCTATGCAAGAGGATGAGCTTTTCAAGGTTTCGTCAATGCTAGAAGAGCTCGTTGGACCTGAAGGGGAGAGACAATTATCAGATACAGATGTCCAATCAGCAATATGGGAGGTTTGCGGTGATTCCGGAGCTTTACAAGTGCTAGTTGATCTTCTTCATGTCAAATTAATGGATCTTGAAGAGCATTCTGGAACAGAGGAAAGTGACTCTGAATTGCTGAAGAAGGCCCTTATCATTGATAGCCAGGAAGATATCAAACAAATGGAAAATGACTCGGAGGAAACAAAGTTGATGACTAGAAACAAATGGTCTGCTATAGTATATAGACGAGGTCAAAAGCAGCTAACTCGATTATTCTTGAAAGAAGCCGAACATGCTCTGCAGTTATCGATGAACGAAGAGATGAGTGTTCCTTAA 1641 0.4034 MANPEAKLDTFLQWLQANGVELRGCNIKYCDSRKGFGIFSDKDVSDGILLVVPLELAITPMRVLQDPFLGPECRALFEEGDVDDRLLMMLLLTVERLRKGSLWKPYLDMLPTTFRNTLWFSEEELQELRGTTLYRATELQKKSLLNLYETKVKDLVKKLWTDGNLEIEVCFEDFLWANSVFWSRALNIPLPRSYVFPEMQNVHQSCTPEADEKGSQVIKSDDLTKETTHSTVQGDTVWVEGLVPGIDFCNHDLKPIATWEVDGTGITTGVPVSMYLLSAAQSPLQIDREISISYGNKGNEELLYLYGFVIDGNKDDYLMVHYPTEAINTISFSESKSQLLEVQNAEMRCLLPKTLLDNGFFPLGTEKSGENKKCNNVCNYSWSGQRKIPSYVNKLVFPEKFMATLRTIAMQEDELFKVSSMLEELVGPEGERQLSDTDVQSAIWEVCGDSGALQVLVDLLHVKLMDLEEHSGTEESDSELLKKALIIDSQEDIKQMENDSEETKLMTRNKWSAIVYRRGQKQLTRLFLKEAEHALQLSMNEEMSVP 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02019 546 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 500 - -
Trre13g02019 546 Gene3D - 361 543 IPR036464 -
Trre13g02019 546 CDD SET_LSMT 31 309 - -
Trre13g02019 546 Gene3D set domain protein methyltransferase, domain 1 5 309 - -
Trre13g02019 546 SUPERFAMILY SET domain 7 313 IPR046341 -
Trre13g02019 546 Pfam SET domain 35 295 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02019 Trre-Chr13 17473168 17478682 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre13g02019 SET 5.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02019 - - gmx:100777394 899.812