Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g02018 ATGGATGAAAGAGGTGTCAATAGCAACACAAGGCTCCTCCATGAAGATAGTGATGGTGATTTAGAAAGGAAGAGTGAAAGACCAAAAGAACCTTGGAGAGGAGAATATGTAAAGAGCATAGTTTATGGAGGGCTTGATGCCATTATCACTTGCTTTTCTCTCATTTCCTCAATCTCAGCTAGTAGTAATTCCTCTGGGAATGTGTTGGTTCTTGGGTTTGCTAACCTAGTAGCAGATGCAATATCAATGGGATTTGGAGACATAGTGTCTGCTAGCTCTGAGAGGGATGTGATCATTGAGGAAAGGAGAGTGACAGAGTGGGATGTTTTGAATAGCAGGGGAAATGAACAAAGAGAGTTAGTAAGATACTATCAATCTCTTGGGATGGACTATAACGATGCAACCGCAGTTGTGAACATATTTACAAAATACAATGACATAATGGTGGAACAAAGAATGGTAGCTGAGAAAGGAATGGTACCAGCAGACCAAGAAGTGAAACCTTGGAAGAATGGCCTCATCACATTTACATCCTTCATGATCTTTGGCTCAATACCTCTACTATCTTTCATCATCCTTATACCATTTACAGAAAGTGATTCAGTTAAGTTTGTAAGTGCTTGCCTTGTTTCAGCACTTGGTCTTGCACTTCTTGGTGTGGCAAGGGCAAGGGTTGCTGGTCAAAAAATGGTGTTCACCACAGCTATTACTCTTTTCAGTGGTGTCATAGCAGGAGCTGCTGCTTATTTAGTAGGTTGGTTGCTAAACAATATTGCAGGAGTAGAAGGTTGA 792 0.4104 MDERGVNSNTRLLHEDSDGDLERKSERPKEPWRGEYVKSIVYGGLDAIITCFSLISSISASSNSSGNVLVLGFANLVADAISMGFGDIVSASSERDVIIEERRVTEWDVLNSRGNEQRELVRYYQSLGMDYNDATAVVNIFTKYNDIMVEQRMVAEKGMVPADQEVKPWKNGLITFTSFMIFGSIPLLSFIILIPFTESDSVKFVSACLVSALGLALLGVARARVAGQKMVFTTAITLFSGVIAGAAAYLVGWLLNNIAGVEG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g02018 263 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 257 IPR008217 GO:0005384|GO:0030026
Trre13g02018 263 Pfam VIT family 38 252 IPR008217 GO:0005384|GO:0030026
Trre13g02018 263 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g02018 Trre-Chr13 17469203 17472015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g02018 1 101 Nodulin-like Gene Family AT1G76800 27.723 1.39e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g02018 K22736 - gmx:100776858 348.977