Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre13g01983 | ATGGATAATAACTATGGTTCATCATCTTCTCCATATCGGTATCCAAACCCTTATATGTATCCACCTAACCCTAACCCTAACCCTAATCCTCATCAACCATATCCACCTCAAGATCCATATGCACATTCACATTCACATTCACATTCACATTCACATTCACATGCTCCTCCTTATCCATATCCTTACATTTCTTCACATTCATTCAACTATTCCTATCCTAGACCATACCCTCCTCCTCCTCAATTAGTACCCTCAGCCATACCCTCTTATCCTTATCCTCCATATCATGTTCCTCAAGGAACTCATAATCCTACTCAACCTTCCCATTCACACCATGCTAGCTTATTACAACATGGATCATCCTCTCATCATTATTATTATCAACAAAATGCGACTTCTCATGAAGATCGTCCCGATGCTCATTCGCGTCATAATAGCTTCTCTGGTCCTTACTGGCATGATACATCAAGTTCAGCAGTTGGTGGTGGTGGTGGTGGTGGTGGAGTATCACAAACTAGTGGTGGTGTTGGTGGTGGTGATAATTCCAGGCCTTCTGCTTATCCGCGTTTGGATGATCTAATGAACAATGTTAGTTTGTCTGATAATCAGGCAACTTCTCCACCTGTTGCAGCTCAACCTTTTATGCATTCGATATCGGTACCGAAGATGCAACAGAAGAAGGAGGATTTTTATGGATATTCGAATAACTCGTTCTCGGGTTATGGGTCCTCGTACCCGAATCGGGTTAACTCGGGTAGATTTTCGGATTTTTCTGGTTCGTTTAATGACTCGATGTATAATCAGAGTTTGCAGGTTGTTCCAGTGCAAAATAAAGGGTCATTGAGAGTTTTGCTCCTTCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCGAATATGGACATGTTCCACAAAACATTGGGGGATATGTTCGGTAAATTACCTGGTAGTGTGAGCAATAAAATTGAAGGAACAATGCATAAGAAGATTACCAGTGATCCTTATGTTTCGATTTCAGTGTCAAATGCCGTAATTGGGAGGACTTTTGTCATTAGCAACTCTGAAAATCCTGTTTGGAGTCAACATTTTTATGTTCCTGTTGCACATTACGCCGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTTGTTGGTTCACAGCTCATTGGTATTGTAGCGATTCCAGTGGAACAAATATACTCCGGGGAAATAGTTGAAGGAGCTTACCCTGTCCTGAATAGTAATGGGAAACCTTGTAAGCAAGGTGCTGTACTGAGCCTATCCATTCAGTACATCCCAATGGAGAAACTAAGCTTTTATCATCAAGGAGTTGGAGCAGGGCCTGAATATATCGGAGTTCCTGCCACTTATTTTCCTTTGAGGAAAGGTGGAAATGTTACTCTATATCAAGATGCTCATGTTCCAGATGGAAGCCTCCCTAATGTGTTGCTTGATAGTGGGATGTTTTATGTGCATGGAAAGTGTTGGCATGACATCTTTGATGCGATAAGTCAAGCTCGCCGCTTGATTTATATTACAGGTTGGTCGGTGTGGCACAAAGTTAGGTTGGTAAGAGATGGCGGTTATGCATCAGATTATACCTTGGGTGATCTTCTGAAGACAAAGTCACAAGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCAACATCAAGAAGTATTTTGGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTAGACGGTTTTTCAAGCACTCGTCAGTCCATGTACTGCTTTGTCCCCGCATTGCTGGAAAACGACATAGCTGGATCAAGCAAAGGGAAGTTGGAACTATATACACACATCATCAGAAAACTGTAATTGTCGACGGGGATGCTGGAAATAACAGAAGGAAAATTATAGCGTTTGTTGGTGGACTTGATTTATGTGATGGGCGATATGATACTCCTCACCACCCTCTCTTTAAGACATTACAGACAATACATAAGGATGATTATCACAACCCCACTTTCACGGGTAACACTGGTGGTTGTCCAAGGGAGCCGTGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCATATGATGTCTTAACGAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCGCATGGGATAAAGAAGTTGAAAATTTCATATGATGACGCTTTACTTAGACTGGAAAGAATTCCAGATGTTATTGGCATTAATGACACTCCTAGTGGTGACGATGATCCTGAATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAGTTCTGTTAAGAGATTTCCAAAAGATCCAAGAGAGGCAACTGGCAAGAACCTTGTATGTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATCGAGAATCAATATTTCATCGGCTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATACCGATGGAAATTGCTCTAAAGATTGTGGAAAAGATTAAAGCAAATGAGAGGTTTGCAGTGTATATAGTTATTCCAATGTGGCCAGAAGGTGTTCCAACAGGTGCTGCCACACAAAGGATTCTCTTCTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCTTGAAGCAGCATTCTCTCCTCAAGACTATTTGAACTTTTTCTGTCTTGGTAATCGGGAGGCCATAAATCTGTACGAAAATGTCAATGTGTCAGGGAATCCTCCCCAAGCAAATACTCCACAAGCAAATAGCCGAAATAGCCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTGATCGTGGGATCTGCAAACATTAACCAACGGTCTATGGAAGGAACAAGAGACAGTGAGATTGCTATGGGAGCATACCAACCTCATCATACCTGGGCAAGAAAACAGTCTTGTCCACATGGACAAATACATGGATATAGGATGTCACTTTGGGCAGAACATACTGGAACAATTGATGACTGCTTCTTGCAACCTGAGAGCCTTGAATGCGTGCGAAGGGTTAGAGCAATTGGTGAAATGAACTGGAAACAATTTGCAGAAAATGAAGTAACAGAGATGAGAGGGCATCTACTAAAATACCCTGTAGATGTAGATCGAAAGGGGAAAGTCAGATCACTTCCCGGTCATGAAGAGTTCCCTGATGTAGGAGGAAAAATTGTTGGATCTTTTCTTGCCATGAAGGAGAATCTTACCATTTGA | 3306 | 0.4117 | MDNNYGSSSSPYRYPNPYMYPPNPNPNPNPHQPYPPQDPYAHSHSHSHSHSHSHAPPYPYPYISSHSFNYSYPRPYPPPPQLVPSAIPSYPYPPYHVPQGTHNPTQPSHSHHASLLQHGSSSHHYYYQQNATSHEDRPDAHSRHNSFSGPYWHDTSSSAVGGGGGGGGVSQTSGGVGGGDNSRPSAYPRLDDLMNNVSLSDNQATSPPVAAQPFMHSISVPKMQQKKEDFYGYSNNSFSGYGSSYPNRVNSGRFSDFSGSFNDSMYNQSLQVVPVQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMHKKITSDPYVSISVSNAVIGRTFVISNSENPVWSQHFYVPVAHYAAEVHFVVKDSDVVGSQLIGIVAIPVEQIYSGEIVEGAYPVLNSNGKPCKQGAVLSLSIQYIPMEKLSFYHQGVGAGPEYIGVPATYFPLRKGGNVTLYQDAHVPDGSLPNVLLDSGMFYVHGKCWHDIFDAISQARRLIYITGWSVWHKVRLVRDGGYASDYTLGDLLKTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVHVLLCPRIAGKRHSWIKQREVGTIYTHHQKTVIVDGDAGNNRRKIIAFVGGLDLCDGRYDTPHHPLFKTLQTIHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDTPSGDDDPESWHVQIFRSIDSSSVKRFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIVEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEAGLEAAFSPQDYLNFFCLGNREAINLYENVNVSGNPPQANTPQANSRNSRRFMIYVHSKGMIVDDEYVIVGSANINQRSMEGTRDSEIAMGAYQPHHTWARKQSCPHGQIHGYRMSLWAEHTGTIDDCFLQPESLECVRRVRAIGEMNWKQFAENEVTEMRGHLLKYPVDVDRKGKVRSLPGHEEFPDVGGKIVGSFLAMKENLTI | 1101 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre13g01983 | 1101 | ProSiteProfiles | C2 domain profile. | 266 | 412 | IPR000008 | - | |
Trre13g01983 | 1101 | Pfam | C2 domain | 288 | 414 | IPR000008 | - | |
Trre13g01983 | 1101 | MobiDBLite | consensus disorder prediction | 101 | 115 | - | - | |
Trre13g01983 | 1101 | Gene3D | Endonuclease Chain A | 493 | 727 | - | - | |
Trre13g01983 | 1101 | FunFam | Phospholipase D delta | 489 | 727 | - | - | |
Trre13g01983 | 1101 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 286 | 436 | IPR035892 | - | |
Trre13g01983 | 1101 | Gene3D | C2 domain | 283 | 424 | IPR035892 | - | |
Trre13g01983 | 1101 | MobiDBLite | consensus disorder prediction | 15 | 37 | - | - | |
Trre13g01983 | 1101 | Pfam | Phospholipase D Active site motif | 948 | 974 | IPR001736 | GO:0003824 | |
Trre13g01983 | 1101 | Pfam | Phospholipase D Active site motif | 614 | 648 | IPR001736 | GO:0003824 | |
Trre13g01983 | 1101 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 947 | 974 | IPR001736 | GO:0003824 | |
Trre13g01983 | 1101 | SMART | pld_4 | 947 | 974 | IPR001736 | GO:0003824 | |
Trre13g01983 | 1101 | SMART | pld_4 | 613 | 648 | IPR001736 | GO:0003824 | |
Trre13g01983 | 1101 | FunFam | Phospholipase D | 760 | 993 | - | - | |
Trre13g01983 | 1101 | FunFam | Phospholipase D delta | 283 | 430 | - | - | |
Trre13g01983 | 1101 | SUPERFAMILY | Phospholipase D/nuclease | 491 | 713 | - | - | |
Trre13g01983 | 1101 | Gene3D | Endonuclease Chain A | 759 | 997 | - | - | |
Trre13g01983 | 1101 | CDD | C2_plant_PLD | 283 | 435 | - | - | |
Trre13g01983 | 1101 | SMART | C2_3c | 289 | 411 | IPR000008 | - | |
Trre13g01983 | 1101 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Trre13g01983 | 1101 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 613 | 648 | IPR001736 | GO:0003824 | |
Trre13g01983 | 1101 | PANTHER | PHOSPHOLIPASE D | 278 | 1092 | IPR015679 | - | |
Trre13g01983 | 1101 | MobiDBLite | consensus disorder prediction | 130 | 185 | - | - | |
Trre13g01983 | 1101 | SUPERFAMILY | Phospholipase D/nuclease | 793 | 1033 | - | - | |
Trre13g01983 | 1101 | MobiDBLite | consensus disorder prediction | 93 | 115 | - | - | |
Trre13g01983 | 1101 | Pfam | Phospholipase D C terminal | 1021 | 1091 | IPR024632 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre13g01983 | Trre-Chr13 | 17191566 | 17197244 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre13g01983 | 172 | 1101 | Phospholipase D Gene Family (Wang group) | AT2G42010 | 73.800 | 0.0 | 1447 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre13g01983 | K01115 | - | gmx:100801286 | 1798.1 |