Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01973 ATGGCGTTGTATCTCACGATACTCGCACTATTCACCACCATCTCCGCTGCCTCCGCCGCAACCAGTTACAAAAACTACACCGTAGGCGGCACCGCCGGATGGTTTTTCAACTCCACTACCAACACTTCTGCCACAAATTACTCTTCTTGGGCGTCTACTCAAACTTTCAACCTCGGCGATTATCTCATTTTCAACACGAATTCAAACCAGAGCGTGATTCTTACATACAACAAAACCGCTTACTTGAACTGCACAGCCGATGATTCAGACAACGAAACATCGATATACAGCGGTGTACCCGATGATTCCGGTGAACCGTTGACTATTTCTGTTCCGTTGACTATTGTGGGATCCAACTACTTCTTCTCCGATTACAATGAAGGTCTTCAATGTCAACAAGGTTTAGCATTTCAGATCCAAGTCCAGCGTGGAATTGGCTTGCCTCCGAGTCTCAACCAGCCTCCTCCTCCGCCGTATATTGAGCCGCCTGGTCCCGATAGCGCTGAATCTCCGTCGGTTACGGTGCCGCAGACACCTAATAGTGGCGCATTTGCTAACCGCGGCGCTGACGTGTGCTTGGCGGTTTACGGACTCGGTGTTGCACTGGTACTGTTGCAATTGCAATTGCAATTTTGGTAA 639 0.4914 MALYLTILALFTTISAASAATSYKNYTVGGTAGWFFNSTTNTSATNYSSWASTQTFNLGDYLIFNTNSNQSVILTYNKTAYLNCTADDSDNETSIYSGVPDDSGEPLTISVPLTIVGSNYFFSDYNEGLQCQQGLAFQIQVQRGIGLPPSLNQPPPPPYIEPPGPDSAESPSVTVPQTPNSGAFANRGADVCLAVYGLGVALVLLQLQLQFW 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01973 212 Pfam Plastocyanin-like domain 42 134 IPR003245 GO:0009055
Trre13g01973 212 SUPERFAMILY Cupredoxins 24 142 IPR008972 -
Trre13g01973 212 Gene3D - 22 143 IPR008972 -
Trre13g01973 212 ProSiteProfiles Phytocyanin domain profile. 24 143 IPR003245 GO:0009055
Trre13g01973 212 FunFam Early nodulin-like protein 18 23 144 - -
Trre13g01973 212 PANTHER BLUE COPPER PROTEIN 23 156 IPR039391 GO:0009055
Trre13g01973 212 MobiDBLite consensus disorder prediction 149 165 - -
Trre13g01973 212 MobiDBLite consensus disorder prediction 147 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01973 Trre-Chr13 16997575 16998354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01973 5 176 Phytocyanin Superfamily AT1G08500 37.912 2.03e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01973 - - psat:127127184 255.758