Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01969 ATGGAGAACCAAATACTTCTAATTGTGATTATGTGTGCAAGCATTCTCATCTTCATTCTTAGAAAATTAAACCAAACTAAAAAATCTACAAATTTTCCACCAGGGCCACACCCACTTCCCATCCTAGGAAATATCTTAGAACTTGGCAAGAATCCACACAAGACACTCACAAAACTCTCTCAAATCTATGGACCAATCATGACACTTAAACTTGGAGCAAGAACAACCATAGTAATCTCATCACCACAACTAGCCAAACAAGTCTTACATGAAAATTCTCAAATATTTTCTAATAGAACTGTCCCACATGCAATTTGTGCAGTAGATCATAACAAATTCTCAATTGGGTGGGTTCCAACTTTAGCTTTGTGGAAGAAACTAAGAAAAGCTTGTGCTACAAAAGTATTTTCTACAAAAATGCTTGACTCAACAAAAATCCTTCGCCAACAAAAGTTGCAAGAATTATTGGATTATGTGAATGAAAAATCCAAGAAATGTGAGGTTTTTGATATTGGTGAGGTTGTTTTTACAAATGTCCTTAATTCAATTTCAAACACTTTATTTTCTATGGATTTGGCTCATTCCACACCTGATGAAAAGTCTCAAGAATTTAAGAACATTATATGGGGTATCATGGAAGAAGCTGGTAAGCCTAATATTTCAGATTTCTTTCCAATTCTTCGTCCATTAGATCCACAAGGTTTGTATGGAAGAATGGCCAATCATATGAAGAAGTTGTGTGAGATTTTTGATGGAATTATTGAAGATAGAATTTGTTCAAGAGATTCCAAAGTTGATTATGAGGTTTGCAATGATGTGTTAGATTCACTTCTTAATAACAACAATATTGAAGAAACCACTTTTAAATTGAGTCGCAATGAGATGGTGCATCTATTCCTGGACTTATTTGTTGCTGGGATAGACACAACATCAAGTATAATTGAATGGATTATGGCAGAGCTACTTCGTAATCCTGATAAATTAACAAAAGCAAGAAAGGAGTTATGTCAAATAATTGATAAAGATGAAACAATTGAAGAATCGCATATTTCTAAGTTACCTTTCTTACAAGCAGTTGTGAAGGAAACATTGAGATTGCACCCACCAATTCCATTATTACTACCTCACAAGTGTGATGAAAATGTGAACATATTAGGTTTCAATGTGCCAAAAAATGCACAAGTATTAGTCAATGTGTGGGCGATGGGAAGAGATCCAACCATTTGGGAAAATCCAAATATATTCATGCCCGAAAGATTTTTGGAGTGTGACATTAATTATAAGGGTAATAATTTTGAACTTATACCCTTTGGGGCTGGCAAAAGAATTTGTCCAGGATTGCCATTAGCTCATAGGACTGCACATTTGATGGTGGCCTCCCTTCTACACAAATTTGAATGGAATCTTGCTGATGGACTAATGCCACAACACATGAACATGGATGAACAATTTGGATTAACTTTAAAAAGGGTTCAATTTCTTCGAGTTCAAGCTATTTCATTAGCTTAG 1509 0.3479 MENQILLIVIMCASILIFILRKLNQTKKSTNFPPGPHPLPILGNILELGKNPHKTLTKLSQIYGPIMTLKLGARTTIVISSPQLAKQVLHENSQIFSNRTVPHAICAVDHNKFSIGWVPTLALWKKLRKACATKVFSTKMLDSTKILRQQKLQELLDYVNEKSKKCEVFDIGEVVFTNVLNSISNTLFSMDLAHSTPDEKSQEFKNIIWGIMEEAGKPNISDFFPILRPLDPQGLYGRMANHMKKLCEIFDGIIEDRICSRDSKVDYEVCNDVLDSLLNNNNIEETTFKLSRNEMVHLFLDLFVAGIDTTSSIIEWIMAELLRNPDKLTKARKELCQIIDKDETIEESHISKLPFLQAVVKETLRLHPPIPLLLPHKCDENVNILGFNVPKNAQVLVNVWAMGRDPTIWENPNIFMPERFLECDINYKGNNFELIPFGAGKRICPGLPLAHRTAHLMVASLLHKFEWNLADGLMPQHMNMDEQFGLTLKRVQFLRVQAISLA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01969 502 CDD CYP76-like 60 496 - -
Trre13g01969 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Trre13g01969 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 499 - -
Trre13g01969 502 FunFam Cytochrome P450 76C4 24 497 - -
Trre13g01969 502 Gene3D Cytochrome P450 22 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 SUPERFAMILY Cytochrome P450 33 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 Pfam Cytochrome P450 33 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01969 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01969 Trre-Chr13 16937964 16940274 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01969 7 494 Cytochrome P450 AT2G45550 46.061 4.96e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01969 - - cam:101504674 764.992