Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01955 ATGGATTATCCAACACTTCTACTAGGAATTACCTTTGTAATTGCAACCGTTCTCATTTTCATTTTTAGAAAACTATACCAAACCCAAAATTCTACAAAACTTCCACCAGGGCCACACCCACTTCCCATTCTAGGAAACATCTTAGAACTTGGCAAAAACCCACACAAGACACTCACAAAATTGTCTCAAATTTATGGACCAATCATGACACTAAAACTAGGAACCATAACAACCATAGTAATCTCATCACCACAACTAGCTAAACAAGTCTTACATGAAAATTCCCAAATCTTTTCTAATAGGACAATACCTCACTCTGCCTATGCATCTGAGCATTACAAATTCTCAATCACATGGCTTCACCCCTTATCAACATCATGGAAAAAACTTAGGAGAGTTTGTGCTACAAAAATATTCTCTCCAAAACATCTTGACTCCACAAAAGTCATTAGACAACAAAAGTTGAAAGAATTGTTAGATTATGTGAATGAAAAAAGCAACAAAGGTGAGGTTTTTGACATTGGTAAAGCTGTTTTTATAACTATGCTTAATTCAATTTCAAACACTTTGTTCTCTAAGGATTTGACTCATATCACACATGGTGAAAAGTCTCAAGAGTTTGAGAATATTGTTTGGGGTATCATGGAAGAAGCTGGTAAGCCTAATATTTCAGATTTCTTTCCAATTCTTCGTCCATTAGATCCACAAGGTTCGTATGGAAGGATGACTAATCATATGAAGAAGTTGTGTGAGATTGTTGATGGAATTATTGAAGAAAGAATTTGTTCAAGAGCTTCCAAAGTTGATTATGAGGTTTGCAATGATGTGTTAGATTCACTTCTTAACAATATTGGAGACACTAGTTCTGAAATGAGCCGGAATGAAATGGTGCATTTGTTTATGGATTTATTTGTTGGTGGGATTGACACATCTTCAAATACAATTGAATGGATTATGGCTGAGTTATTACGTCACCCCGACAAATTAACGAAAGCAAGAAAAGAATTATGTGAAGCAATTGGCAAAGATGAAACAATTGAAGAATCACATATTTCCAAGTTAACTTATTTACAAGCAGTTGTGAAAGAAACATTTCGATTGCACCCTACAGTTCCATTATTGATACCCCACAAATGTGATGAAAATGTGAAAATATTAGGCTTCAATGTGCCAAAAAATGCAGAAGTATTAGTCAATGTGTGGGCCATGGGAAGAGATCCAACCATTTGGAAAAATCCAAATATGTTCATGCCCGAAAGATTTTTGGAGTGTGATGTAAATTATAAGGGTAACAATTTGGAGCTTATACCCTTTGGGACAGGCAAAAGAATTTGTCCAGGATTGTCGTTGGCTCATAGGATTGTGCATCTAATGGTGGCATCCCTTTTACACAACTTTGAATGGACACTTGCTGATGGACTAATTCCAGAAAACATGAATATGGATGAACAATTTGGATTATCCTTAAAAAGGATCCAACCTCTTCGAGTTCAAGCTAAATAA 1503 0.3546 MDYPTLLLGITFVIATVLIFIFRKLYQTQNSTKLPPGPHPLPILGNILELGKNPHKTLTKLSQIYGPIMTLKLGTITTIVISSPQLAKQVLHENSQIFSNRTIPHSAYASEHYKFSITWLHPLSTSWKKLRRVCATKIFSPKHLDSTKVIRQQKLKELLDYVNEKSNKGEVFDIGKAVFITMLNSISNTLFSKDLTHITHGEKSQEFENIVWGIMEEAGKPNISDFFPILRPLDPQGSYGRMTNHMKKLCEIVDGIIEERICSRASKVDYEVCNDVLDSLLNNIGDTSSEMSRNEMVHLFMDLFVGGIDTSSNTIEWIMAELLRHPDKLTKARKELCEAIGKDETIEESHISKLTYLQAVVKETFRLHPTVPLLIPHKCDENVKILGFNVPKNAEVLVNVWAMGRDPTIWKNPNMFMPERFLECDVNYKGNNLELIPFGTGKRICPGLSLAHRIVHLMVASLLHNFEWTLADGLIPENMNMDEQFGLSLKRIQPLRVQAK 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01955 500 Gene3D Cytochrome P450 21 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 Pfam Cytochrome P450 35 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 498 - -
Trre13g01955 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01955 500 FunFam Cytochrome P450 76C4 26 498 - -
Trre13g01955 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Trre13g01955 500 CDD CYP76-like 62 497 - -
Trre13g01955 500 SUPERFAMILY Cytochrome P450 35 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01955 Trre-Chr13 16744537 16746838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01955 5 495 Cytochrome P450 AT2G45550 45.657 5.04e-160 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01955 - - cam:101504674 779.63