Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01876 ATGCTAACTCTCAATCTCAATGCTCTTTCTTCTTCTTCGTTCAAAATTGTTCCCTTTCATGTCAATTATCCACTCTATACTCAAACTCAGTTGTTAATTCCCACTAATCTTAATTACCCTTTTACTAATACAGCAACCAGAAAGTTCAGGACTTTTCAGCTCAAGGCTGGATTTTGGGAATCAATTAAATCTGGGTTGATAAAGAATAACACCACGCAGGTCATTGATCCGGAGACAACAGATGAAGTAGATGAAGAACCTCTACCTCAAGAGTTTGTGCTTGTTGAAAAGACTGAAGCTGATGGAACAATTGAACAAATAATATTCAATTCGGGTGGAGATATTGATGTTTATGATCTTCAAGCCCTCTGCGACAAGGTAGGGTGGCCTCGTAGGCCATTGTCAAAATTAGCCGCTGCTTTGAAAAATAGCTATATGGTGGCCTGTCTGTATTCCGTACGAAAGTCACCAGGGTCAGAGGGGAATGAACAAAAGTTATTAATTGGCATGGCTCGTGCTACATCAGACCATGCCTTCAATGCCACAATTTGGGATGTCCTTGTTGATCCTGGCTACCAGGGCCAAGGTCTTGGTAAAACTCTTGTGGAGAAACTGATTCGAGCTCTTTTGCAAAGGGACATCGGTAATATAACTTTGTTTGCAGATAGTAAAGTTGTGGAATTTTATCGCAATTTAGGTTTTGAAGCTGATCCGGAGGGCATAAAAGGCATGTTCTGGTACCCAACTCAATGA 753 0.409 MLTLNLNALSSSSFKIVPFHVNYPLYTQTQLLIPTNLNYPFTNTATRKFRTFQLKAGFWESIKSGLIKNNTTQVIDPETTDEVDEEPLPQEFVLVEKTEADGTIEQIIFNSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYMVACLYSVRKSPGSEGNEQKLLIGMARATSDHAFNATIWDVLVDPGYQGQGLGKTLVEKLIRALLQRDIGNITLFADSKVVEFYRNLGFEADPEGIKGMFWYPTQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01876 250 FunFam Putative acetyltransferase NSI 111 247 - -
Trre13g01876 250 Gene3D - 111 247 - -
Trre13g01876 250 CDD NAT_SF 167 219 - -
Trre13g01876 250 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 116 239 IPR016181 -
Trre13g01876 250 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 107 250 IPR000182 GO:0016747
Trre13g01876 250 Pfam Acetyltransferase (GNAT) family 116 234 IPR000182 GO:0016747
Trre13g01876 250 PANTHER ACYL-COA N-ACYLTRANSFERASE 8 248 IPR045039 GO:0008080
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01876 Trre-Chr13 15956243 15959285 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre13g01876 Acetyltransf_1 6.6e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01876 K22450 - gmx:100799333 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g01876 13 15956243 15959285 Trre13g01876 13 15956243 15959285 ECH