Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01809 ATGTTTGAGCACGTTGTTACTTCTATACAAGGATTTTTAAAAAATAATGAACTTGAAAATCTACCAAAGGTTCCTGAAATATCAAGTCATGTTCATGGTCTTGGTAATCTAACTATAAATGAATGTATGTTAGTGAATACACCAACACAAAGTTATGATGAAGAAAATAGAATCGTGTCTCGACTTGCAATTCCTGGTATGCAAGAATTGGTTAGGCCTGTAATAGTGAATGAGCCTTTTTGGATCAATTTTTCAAATACTAATCAAGATGGGAGATACACTCTTGATCATGAAAGTTATTATCATGTTTTTCCCAAGAACAATCACATTAGAGGTGATAATGTTTCTGAAGAATCTTCAAAGTATTACATAATAGTTGGGATTGATGGCATGAAATTGGTTGAAATTTTTCAGGATTAG 420 0.319 MFEHVVTSIQGFLKNNELENLPKVPEISSHVHGLGNLTINECMLVNTPTQSYDEENRIVSRLAIPGMQELVRPVIVNEPFWINFSNTNQDGRYTLDHESYYHVFPKNNHIRGDNVSEESSKYYIIVGIDGMKLVEIFQD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01809 139 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 24 139 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01809 Trre-Chr13 15412615 15413034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01809 53 139 Homeobox Transcription Factor Family AT1G73360 35.955 7.03e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01809 - K09338 mtr:112419334 100.523