Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01807 ATGGGAAATTACAGGTTCAAATTGTCAGATATGATGCCTAATGCTTGGTTTTACAAGCTTAGAGACATGGGAAGAACAAGAAATCAAACACAAACAACACAACAACAACAAAGAAAGAAAAAGAAATCTTCAAATTCAACAACCTCAAACACATCAAAATCAAAGCAACAACACTACCAAACCAATCCAAGAAAATCTTACTATTTTACAAGAGAACTTAACCAAACAACTTCACCACCAATAACAACAAACAACACAAATTTTTCACCTGAACAACCATCTAGAAAATCATCATCAAAACAACAAAGAACAAAAAAAAGAACACCAAAATCTTCATCTTCAACATCATCTCCACTTTATAGTTCTGCAGAATCAGAGTCCCCTGACCCAGAAATCAGAACAGACCGTGTTCTTCTTCCAACAAATGACATCATAATAGATGTTGACAACAATTCTCTCATTGCAACAAGAAAAGATGATAAGCTAAATGGGTATGATTCATTATCAGAACTCATGAAACTTCCACCAATTGTGACAAAACCAGAAAACTTCAATTACTTGCTCAACTATGCAAAAAAGAAACAAACAAAACCCAGAAACAAAATCTCATCAAATGATGAACATAACGTTAAAGGGTCACTAAAAGTCAAGATTTTGAAGGAAGAACATAGGAACATCAACACAAACACACCAAGTAGAAGATTCTCTATGAGTTCACCTGGTGTGAAACTTAGAATCAATTCACCAAGACTTTCAAGCAAGAAAATTCAATCAAATGGCAGGAAAAGCGTGTCGTCGACTACCACCAGTTCAGCCGGAAACCGGAGAAGTCTTTCGGATAGTTTCGCAATTGTGAAGTCATCAATGAATCCACAGAGTGATTTCAGAGAATCAATGGTGGAGATGATTGTTCAGAACAATATTAGAACATCAAAGGATTTAGAAGATCTTCTTGCTTGTTACCTTTCTTTGAATTCAGATGAGTATCATGAAGTTATCATCAAAGTTTTCAAGCAAATTTGGTTTGATTTGACTGATAATCAGTAG 1047 0.3477 MGNYRFKLSDMMPNAWFYKLRDMGRTRNQTQTTQQQQRKKKKSSNSTTSNTSKSKQQHYQTNPRKSYYFTRELNQTTSPPITTNNTNFSPEQPSRKSSSKQQRTKKRTPKSSSSTSSPLYSSAESESPDPEIRTDRVLLPTNDIIIDVDNNSLIATRKDDKLNGYDSLSELMKLPPIVTKPENFNYLLNYAKKKQTKPRNKISSNDEHNVKGSLKVKILKEEHRNINTNTPSRRFSMSSPGVKLRINSPRLSSKKIQSNGRKSVSSTTTSSAGNRRSLSDSFAIVKSSMNPQSDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHEVIIKVFKQIWFDLTDNQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01807 348 MobiDBLite consensus disorder prediction 26 97 - -
Trre13g01807 348 MobiDBLite consensus disorder prediction 228 275 - -
Trre13g01807 348 MobiDBLite consensus disorder prediction 108 124 - -
Trre13g01807 348 Pfam DNA-binding domain 1 44 IPR025830 GO:0003677
Trre13g01807 348 ProSiteProfiles OVATE domain profile. 284 343 IPR006458 -
Trre13g01807 348 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 43 346 IPR038933 GO:0045892
Trre13g01807 348 MobiDBLite consensus disorder prediction 26 132 - -
Trre13g01807 348 Pfam Transcriptional repressor, ovate 288 344 IPR006458 -
Trre13g01807 348 NCBIfam uncharacterized plant-specific domain TIGR01568 283 345 IPR006458 -
Trre13g01807 348 MobiDBLite consensus disorder prediction 229 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01807 Trre-Chr13 15372044 15373090 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre13g01807 Ovate 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01807 - - aprc:113863721 360.147