Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01797 ATGGCTAAAATTATTTCAATTTCCAAAACTTATTTGATTTTATGCTTTGTTGGGATAGTTTCAGCCCAATTGTCCTCTGATTTTTACTCAACAACATGTCCTAATGCACTTTCAACTATTAAGTCGGTTGTAGATTCTGCTGTGGAAACTGAGGCTCGTATGGGAGCATCACTCCTTCGTCTTCAATTCCATGATTGTTTTGTTCAAGGATGTGATGCATCAGTATTATTAGACGATACATCAAGTTTCACAGGTGAAAAAACAGCAGGTCCAAACGCTAATTCTTTAAGGGGTTTTGATGTAATCGACACCATCAAGTCTCAACTCGAAGACTTGTGTCCCAAAGTTGTCTCGTGCGCTGATATTGTCGCCGTAGCTGCAAGAGACTCTGTTGTCAAACTGGGTGGACCTAGTTGGGCAGTGCAATTGGGCAGAAGGGATTCAATCACAGCAAGTTTAAATCTTGCAAACACAGATTTACCTGGTCCTGATACGGATCTAAGTGGTCTTATTGATGCTTTTGATAACAAAGGTTTCACACCCAAAGAAATGGTTGCTCTATCAGGAGCTCACACAATTGGTCAAGCAAGGTGTTTATTCTTCAGAAACAGGATTAACAATGAAGACAACATAGATCCAACTTTTGCAACATCATTGCAAGCAAATTGTCCTACAACAGGTGGTGATGACAATTTGTCACCACTTGACACAACAACTCCAAACACATTTGACAATGCTTATTACCAAAACTTGCAAAATCAAGAGGGACTCTTTCATTCTGATCAAGAACTTTTCAATGGAGGATCTACAGATTCTGATGTTGATGAATATAGTAGTGACCCTTCAAGTTTTGCTAATGATTTTGCTAATGCTATGATTAAAATGGGAAATCTTAATCCACTTATTGGGACCAATAATGGTCAGATTAGGACAAATTGCAGGGCTATCAATTAA 954 0.3857 MAKIISISKTYLILCFVGIVSAQLSSDFYSTTCPNALSTIKSVVDSAVETEARMGASLLRLQFHDCFVQGCDASVLLDDTSSFTGEKTAGPNANSLRGFDVIDTIKSQLEDLCPKVVSCADIVAVAARDSVVKLGGPSWAVQLGRRDSITASLNLANTDLPGPDTDLSGLIDAFDNKGFTPKEMVALSGAHTIGQARCLFFRNRINNEDNIDPTFATSLQANCPTTGGDDNLSPLDTTTPNTFDNAYYQNLQNQEGLFHSDQELFNGGSTDSDVDEYSSDPSSFANDFANAMIKMGNLNPLIGTNNGQIRTNCRAIN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01797 317 Gene3D - 27 314 - -
Trre13g01797 317 Gene3D Peroxidase, domain 2 161 295 - -
Trre13g01797 317 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 Pfam Peroxidase 41 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Trre13g01797 317 ProSiteProfiles Plant heme peroxidase family profile. 23 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Trre13g01797 317 FunFam Peroxidase 27 171 - -
Trre13g01797 317 FunFam Peroxidase 161 295 - -
Trre13g01797 317 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 SUPERFAMILY Heme-dependent peroxidases 23 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre13g01797 317 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601|GO:0042744
Trre13g01797 317 PANTHER PEROXIDASE 72-RELATED 17 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01797 Trre-Chr13 15206136 15210375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01797 19 317 Peroxidase AT5G05340 61.794 9.64e-134 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01797 K00430 - gmx:100815142 471.47