Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01795 ATGATCCTTCCAATCACCAAAGTTCAATTTTTCTTACTCTTTTGCTTTATTGGCACAATTTCAGCTCAATTATCCCCTGACTTTTATGACAAAAAATGTCATGATCATCTTTTGCTTCACACCATTAAAACAGAAGTAAAACAAGCTGTGGACGATGAGGATCGCATGGGGGCCTCTCTACTCCGTCTTCATTTTCATGATTGTTTTGTTCAAGGATGCGATGCATCAGTACTGTTGGACGATACAACAAATTTTATAGGTGAAAAAACAGCACGTCCAAATAATAATTCACTCAGAGGCTTTGATGTAATCGACAAAATAAAATCTAAAGTGGAGAAGTTATGCCCCAATACTGTCTCTTGTGCTGATATTCTTGCTGTGGCAGCAAGAGACTCGGTTGTTGCACTTGGTGGACCTAGTTGGAGTGTTCCATTGGGCCGAAGAGATTCAACCACTGCAAGTTTGAGTTCAGCTAACTCAGACATTCCAGGTGGCGGTTCTGATCTAAGTGTCCTAGTTAATACTTTCTCCAACAAAGGTTTTACAGTTAGAGAGATGGTTGCTCTTTCAGGATCACACACAATTGGTCAAGCAAGCTGTAGAACCTTCAGAAACAGGATTTACAATGAGACCAACATAGATTCATCTTTTGCAACATCATTGCAAGCAAATTGTCCAACAACAGGTGGTAATTTTAATTTGTCACCACTTGACACCACCTCTCAAAACAAATTTGACAATGCTTATTACAAGAACTTGCAAAATCTAAAGGGTCTCTTACATTCTGATCAAGTGCTTTTCGATGGATCCACAATAGCACAGATTAATTTTTATGCTAACAGCCATTCAAGTAAATTTGAAGATGATTTTGCCGATGCAATGGTCAAAATGGCAAACCTTAGCCCACTTACTGGGTCTAGTGGTGAAATTAGAAAAATTTGTGGGAGAGTCAACAAAGATTTTGGGCCTTAG 972 0.3889 MILPITKVQFFLLFCFIGTISAQLSPDFYDKKCHDHLLLHTIKTEVKQAVDDEDRMGASLLRLHFHDCFVQGCDASVLLDDTTNFIGEKTARPNNNSLRGFDVIDKIKSKVEKLCPNTVSCADILAVAARDSVVALGGPSWSVPLGRRDSTTASLSSANSDIPGGGSDLSVLVNTFSNKGFTVREMVALSGSHTIGQASCRTFRNRIYNETNIDSSFATSLQANCPTTGGNFNLSPLDTTSQNKFDNAYYKNLQNLKGLLHSDQVLFDGSTIAQINFYANSHSSKFEDDFADAMVKMANLSPLTGSSGEIRKICGRVNKDFGP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01795 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre13g01795 323 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Trre13g01795 323 FunFam Peroxidase 163 297 - -
Trre13g01795 323 PANTHER PEROXIDASE 72-RELATED 16 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 CDD secretory_peroxidase 23 317 IPR033905 GO:0004601|GO:0042744
Trre13g01795 323 ProSiteProfiles Plant heme peroxidase family profile. 23 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 Gene3D - 27 314 - -
Trre13g01795 323 FunFam Peroxidase 27 185 - -
Trre13g01795 323 Pfam Peroxidase 43 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 SUPERFAMILY Heme-dependent peroxidases 23 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre13g01795 323 Gene3D Peroxidase, domain 2 163 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01795 Trre-Chr13 15101758 15105973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01795 20 318 Peroxidase AT5G05340 60.927 2.86e-130 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01795 K00430 - gmx:100815142 449.129