Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01742 ATGTCCCTAGCTGTGGCTGTCACACTCATCCTCACTTTATTCCTATATGCTTTTCATCAAACAAAATCACTAAAAACTCCTGCCTTCACAAATTGGCCTTTTATTGGCATGTTACCTCAATTCCTTTGGAACATATCACACATCCATGAATATTCAACTATATTGTTGAAATCAAAAGGTGGCACAATTGAGTTCATAGGACCATGGTTTACCAAAATGGTGGGTGTAATCACATCTGATCCAATCAATGTTCACCATATCATGAGCAAGAGATTTGACAACTTTGTGAAAGGTGATTCGTTTCGCGAAATGTTTGAACCTTTTGGCGAAGGAATTTTCACTACGGATTCACATAAATGGAAACACAATAGAACGCTTCTCCAATTTCTCTTCAAACAAAGAAGCTTTGAAGCTTTTCAAGAAAAAATCATTCACAACAAAGTTGAGAAATCATTGATTCCTTTATTGAATCAAGTTCAACTACAAAAAGGGTCGGTGGTCGATTTACAAGATGTCTTCAACCGCTTTACATTCGATAATATTTGTTTGATAATCCTTGGACATGATCCTAACTGTCTTTCCATTGATTTTCCTGAAGTTGCGGCCGAGAAGGCTTTTAACCAAGCTGAAGAATCCATCTTCTATAGACACACCGTTCCGCCTTTTGTTTGGAGGTTGCAAAGCTGGCTTCAAATCGGTGAAGAGAAAAAAATGACCGAGGCATGCAAAATATTTGATCAATTCCTATTTTCATGCATAGCTTCAAAACGTGAAGAACTTATGAAAAATTGTAAAAATAATGAAATCGATACTGAAAGTGATGAAACTCGTCATGTTGATTTGCTAACGGCGTTGATTAGAGAAGAGCAAAAAAATATGGATAGCGAATCAAGTGGTGACAAGTTTCTAAGAGATGCTGTATTCAATCTCTTTGTAGCGGGGAGAGATACTATAACTTCGGCGCTTACATGGTTATTTTATCTCATCGCAACGCACCCTTTAGTGGAAGCCAAGATTCTTGAAGAGATAAAAGAAAATTTTGGACACAAAAAAAAGCCTTGGATATTAAGTGTTGATGAAGTGAAAAAACTTGTTTATCTTCATGGTGCTATATGTGAGGCATTGAGGCTTTTTCCACCTATACCTTTTGAGAGAAAAGAAGCAGTTACACCCGATATACTTCCAAGTGGTCATCATGTCTATCCAAATGCAGTGATATTGTTTTCTTTGTATGCAATGGGAAGGGATAAAGATATTTGGGGAGAAGATTACTTGGAGTTCAAGCCAGAGAGGTGGATTTCTGAGAGAGGAGGTATTGTTTACGCGCCGTCTTACAAATTTTTTAGTTTTAATGCTGGACCTAGGACTTGTTTGGGAAGAGATTTGGCTTTCATTCAAATTAAGATGATAGCTGCTTCTGTTTTGTGGAACTATGGTGTTCAAGTTGTGGATGTTAATCAAGTCACTCCCAACCTTTCAATTGTACTTCTCATGAAACATGGGGGTGTATCAGCTTTTTTGGAGAGCTTAACTCGTGTAGAAAGCTACTGTTGCAGTTTAGTCGAGGAGGTTGAAACCGAGCAGCTTAAGGCGTCTGTTGATTATTTTGTGGAGTTGTGTGAGACTGTATCACCTGTGGATGATTCAAAGTTTGCAAACTTGGCACACCAATCCGTTGAATTTATATTAGAGTTTATGGAAAGCGCTATGGCTGGATCTACATCTCTTTCTACACCGGAAGGTGAGGTTAACAATTTGATGCAACAGATGGCGGATGATTATGGACTTGAGGTTTCTGTCGGTCTTCCTCAGCCTGCTGGTCATGCTGTTCCTGTTAAGGAGAAGGATAGTGAGAAGGTTGATGAGGATGATTTGTTGAGGCGTCTCGCGGAGCTTAAAGCTAGAGGTTAA 1911 0.3878 MSLAVAVTLILTLFLYAFHQTKSLKTPAFTNWPFIGMLPQFLWNISHIHEYSTILLKSKGGTIEFIGPWFTKMVGVITSDPINVHHIMSKRFDNFVKGDSFREMFEPFGEGIFTTDSHKWKHNRTLLQFLFKQRSFEAFQEKIIHNKVEKSLIPLLNQVQLQKGSVVDLQDVFNRFTFDNICLIILGHDPNCLSIDFPEVAAEKAFNQAEESIFYRHTVPPFVWRLQSWLQIGEEKKMTEACKIFDQFLFSCIASKREELMKNCKNNEIDTESDETRHVDLLTALIREEQKNMDSESSGDKFLRDAVFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGHKKKPWILSVDEVKKLVYLHGAICEALRLFPPIPFERKEAVTPDILPSGHHVYPNAVILFSLYAMGRDKDIWGEDYLEFKPERWISERGGIVYAPSYKFFSFNAGPRTCLGRDLAFIQIKMIAASVLWNYGVQVVDVNQVTPNLSIVLLMKHGGVSAFLESLTRVESYCCSLVEEVETEQLKASVDYFVELCETVSPVDDSKFANLAHQSVEFILEFMESAMAGSTSLSTPEGEVNNLMQQMADDYGLEVSVGLPQPAGHAVPVKEKDSEKVDEDDLLRRLAELKARG 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01742 636 PANTHER CYTOCHROME P450 18 501 - -
Trre13g01742 636 SUPERFAMILY Cytochrome P450 19 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 CDD CYP86A 64 501 - -
Trre13g01742 636 Gene3D Cytochrome P450 14 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 Pfam Cytochrome P450 28 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Trre13g01742 636 Gene3D - 582 633 - -
Trre13g01742 636 Coils Coil 615 635 - -
Trre13g01742 636 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01742 636 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01742 Trre-Chr13 14438667 14444750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01742 3 501 Cytochrome P450 AT2G23180 43.912 5.85e-150 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01742 - - tpra:123904061 931.398