Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01707 ATGGATATTGAAAACAAGGTGAGTCTTCCACACTTGATGGAAGCACATGGAGAAGCCTTGGAGAAAGAACAAAAAGCACTAGCAAAATCAATTTTGAAGTGCATAAGCCAAAAAGTTACTACTCCAATTGAGACAGTTGCATTTTATTTGTCTCAAGAAATGACAAATCATGGAGATTATCTCAAAGGAGAAGCACACAAGAATTTTGATGCTTCTTTCAAGGCTCTCTATCAAGGGAATTTAGTTGGAAAAGTTGCTCATTTTGCAGCTATTTCAGCAATTCTTGAGGCTGCTATGTTAGAAGATTGTGATGAAATTCACATAATAGATTTTTGTATTGGAAATGGTGTTCAATGGCCTTCTTTATTAGAGGCTACTTCAAAAATAAACAAAAGATTGAAATTGACATCGATTAAACCGCGTAACGATGAAAATTCTCAATGTGTTTGGAATTTTGAGGATACCAAAAGGGAACTTTATGATTATGCTAAATCATGTGGTTTGAAATTGGTGGTAGAAGAAAAGGGATTGGAGGAATTGGTTAGTCATATCAAAATAATGAACAAAAAGGGTGGAAACAAAGTGTTTTTGGCTTTTAATTTGATGATTGGTCTTCCTCATATGGGAATGGTAAGAAGCTTAAGAAAAAGTGCTTTTGAGTTTTTCAAGGTAGCTGAGGATTTGATTAAAAATTATGGTGGAAAGGGAATGATTACTTTTGGAGATGGTGATGCATTTGAGAAACTAAAAAATAGTTTGAATTTTAAGTCATTTTTTGAAGGGAATTTGGTTCATTATAAGGCTTTGTTGGAATCAATTGAATCACAATTTTCAGCTCAATTCTTAGAGGCAAGAATTGCATGTGGGGTGTTGTTTGTGGCACCTTGTATATCTTCTCTTGATTGGTTACAAACATGGGAAGAAATGAAAAGTGATGGTCATTTGATGGAGGTCAAAGAATTGTTGAGAGGATGTGAAAGTTCATATCAAGCAAAAGTTGAAGGAGAAAATGGGAATGAAATTGTTTTGGAATGGAAAGGAACACAATTATTAAGATTTTCCATTTGGAAAAACTAA 1077 0.338 MDIENKVSLPHLMEAHGEALEKEQKALAKSILKCISQKVTTPIETVAFYLSQEMTNHGDYLKGEAHKNFDASFKALYQGNLVGKVAHFAAISAILEAAMLEDCDEIHIIDFCIGNGVQWPSLLEATSKINKRLKLTSIKPRNDENSQCVWNFEDTKRELYDYAKSCGLKLVVEEKGLEELVSHIKIMNKKGGNKVFLAFNLMIGLPHMGMVRSLRKSAFEFFKVAEDLIKNYGGKGMITFGDGDAFEKLKNSLNFKSFFEGNLVHYKALLESIESQFSAQFLEARIACGVLFVAPCISSLDWLQTWEEMKSDGHLMEVKELLRGCESSYQAKVEGENGNEIVLEWKGTQLLRFSIWKN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01707 358 ProSiteProfiles GRAS family profile. 1 357 IPR005202 -
Trre13g01707 358 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 280 IPR005202 -
Trre13g01707 358 Pfam GRAS domain family 22 281 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01707 Trre-Chr13 14085386 14086524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01707 42 277 GRAS Transcription Factor Family AT5G66770 25.506 2.18e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre13g01707 GRAS 2.1e-18 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01707 - - tpra:123890000 586.645