Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01699 ATGAATATGAAGGAGGAAGAAATATGTGGCTCAATATGTTCCAAGACAAGTGTTTCAATTAATGAACATGGTTGTGAAATTAGTGAAGAAGCAAATGAAGATGAAGAAAGTAAGCAAAATAATAATGGAGGAATAAGCTCAAGCAATAGTACTATTGAAGAGAATTCTGAGAAGAAACCATCAGTGAGACCATATGTTAGATCCAAGTTTCCTAGGCTACGTTGGACTCCTGATCTTCATTTTCGATTTCTTCATGCTATTCAAAGACTTGGTGGACAAGAGAGAGCAACTCCAAAATTGGTTCTTCAATTGATGAATATAAAAGGTTTGAGTATTGCTCATGTGAAGAGTCATTTGCAGATGTATAGAAGCAAAAAAGTAGTTGACACAAATCAAGACAATGGAGACAAAAATGTTTACAATCTCACACAACTTCCTATGCTTCAAGGCTATACTCCAAACCAAACTTCATCAAATAGATGTGGATATGGAGAGGCTTCTATTGCCATGTATGAAAACATGGTGCATATGAGTTCAATAAATGAATCTAGAGCTGATTTCTATGGAAGAATGATTGAGAGAACCAATAATAACAACATCAATATGCAAGCTCATAATATTTTCCAAGTGGATGATGCATCAACTTTTAGAGAATTATCATCAACAAGTAAAGTCCAAGAACCAAAAAATAATTTCGTCTCATTTTGTGGCAATGAATCTTTTAAATTAAGCAAGAAGGATGATCTTCAAGTACAGCCTAGAGAACAAGAGCTCATGCCAAATGATAATCAAGTGGACTTAAAGACATTGAAAAGAAAAGCTTCAAATTTGGACCTTGATTTGGATCTATCACTTAAATTAAATTCAAGGATCATTGATCATGAGAACCAAGGAAGTATAGAGGATCATCATGAAGTTGGAAGCAATTTATCTCTCTCATTGTATTCTCAATCCTCTTATAATCTTTGCAAAAGAAACAAAGAAGGACAAGATGATTCTAAGGAGCAAGAGAAAAGAGTCAATATAGGTTTGGATCTAACCATATGA 1047 0.3391 MNMKEEEICGSICSKTSVSINEHGCEISEEANEDEESKQNNNGGISSSNSTIEENSEKKPSVRPYVRSKFPRLRWTPDLHFRFLHAIQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVVDTNQDNGDKNVYNLTQLPMLQGYTPNQTSSNRCGYGEASIAMYENMVHMSSINESRADFYGRMIERTNNNNINMQAHNIFQVDDASTFRELSSTSKVQEPKNNFVSFCGNESFKLSKKDDLQVQPREQELMPNDNQVDLKTLKRKASNLDLDLDLSLKLNSRIIDHENQGSIEDHHEVGSNLSLSLYSQSSYNLCKRNKEGQDDSKEQEKRVNIGLDLTI 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01699 348 Gene3D - 71 127 - -
Trre13g01699 348 MobiDBLite consensus disorder prediction 38 55 - -
Trre13g01699 348 NCBIfam myb-like DNA-binding domain, SHAQKYF class 71 126 IPR006447 GO:0003677
Trre13g01699 348 SUPERFAMILY Homeodomain-like 71 125 IPR009057 -
Trre13g01699 348 FunFam Myb family transcription factor 69 127 - -
Trre13g01699 348 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 51 215 IPR046955 GO:0003700
Trre13g01699 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 127 IPR017930 -
Trre13g01699 348 MobiDBLite consensus disorder prediction 28 63 - -
Trre13g01699 348 Pfam Myb-like DNA-binding domain 73 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01699 Trre-Chr13 14042858 14044937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01699 62 127 G2-like Transcription Factor Family AT2G42660 77.273 7.37e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre13g01699 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01699 - - gmx:100802192 367.466