Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01691 ATGACCTCTTTGGCTGGGTCAGCAGGTTGGGATGTCAGCAATAAGCCAGAGTTTGAAGAGATTGAAAAAATTGTTGAGGCCGTGATAAAAAAATTGGGTCATAAATTCTCAGGGTCTGCTGATGACCTTATTGGAATACAACCTCGTTTAGAAGCATTAGAAAGCCTTTTAAAACTAAGCTCAAAGAATGATGATGAGCCAGGATGTTGGAGTAGGTTGTGGCTTTACCGAGATTTCCAATACGTGATGATGACCGAAAAGAAAGCAATAGATGCTAAAGCCGTAATTCTAAATCAGAAAGTGGATGACTTCAAATTGAATGAGTTGAGGGCTGAAGATTTATCTAAAATGGAGCAGTTGAAAATGCTAATATTGAATCATAAGAATTTTTCAGGAAGACCCTCATTTCTTTCTAATTCCCTACGTTATCTTTTGTGGAATGGTTACCCTTTCATTTCTTTGCCATCAAATTTTCAACCATATCACCTTGTTGAATTGAATTTGCCTGATAGCAGCATCGAACAACTATGGACAGATACCCAGCAACTACCCTATTTGAAAAGGATGGATCTGAGCAACTCTAAAAACCTCAAGATGACACCGTGCTTTAAAGGGATGCAGAATCTTGAGCGACTAGATCTTACAGGATGCATAAACTTATGGCATCTGCATTCATCAATTGGACTTCTTACAGAACTTCAATTCTTGAGCTTGCAGAACTGTAGCAGTCTGGTCTGCTTTGATTTTGGCAGTGAATCAAAGTTAAGTTCTTTGAGAGTTTTGTGTCTCTCTGGTTGCACAAAACTTGAAATTACTCCCGATTTCAGGGGACTATTAAATCTTGAGTATCTTGACATGGATCTATGTACAAGTTTATATACGATTCATAAATCTATTGGGTATCTTACAAAGCTTAAATTCTTAAGTTTGAGAGGCTGCATAAATCTTGTCAGAATACCTGACAGCTTTAACGATATGACATTTCTTATGACACTAGATCTATGTGGATGCTCTAAACTTACGAATCTTCCGCTAGGATCTATATTCAGTTCTAAAACTCTACAATTTTTTATTTTTATCGACCTAAGCTTTTGTAATATTTCTGAAGTACCTGATGCTATTGGAGAACTAAGAGGTTTAGAGAGACTAAACTTACAGGGAAATAACTTCACTGGACTACCTCTTACCATCCAAACACTTTCCAGTCTATCATATTTAAATTTGTCACATTGTCATAGGCTTCAAGTTTTGCCTTGGACTCAAACAGAAAGCGGTCCATCGGATTCTGTGGGAAGATATTTTAAAACAAAGTCCGGATCCCGTGATCACAGGTCAGGATTGTATGTTTTTGATTGTCCCAAGCTGGAGGAGGCATACACAGTCTGTCAATACACATTATTTAAATGGCTTAAAAGACTAGTTAAGGAGCCTCATCACTTCCGATGTGGCTTTGACATTATTCTTCCCTGGCTATGGAGAGATATTCCTTATTGGTTTGATTATCGATTTAAAAGAGGTTCAATAATAAGGATAAAGGAGTCTAATCTGCAAGTCGACTGGCTCGGCTTTGTTTTTTGTATATTATTTGTGGTGAATAGTTATTCTGTAGTGTCTGGTTCTCCACATCAATCACTTTCCGCACCACTTCCACATCCTTTTTATCTTTCTTTTGAAAGTGAATACACGGAAGAGCGATTTGATATGCCACTTAATCTGGAACGGAATATGGTTGATGGCAAAAATTATCTTTGGACAATCTATATCTCTCAAGAGCACTGCCATTTTGTGAAAACTGGAGCGCGAATCAGATTTAAAGCCGGGCAAGGATTGATTATGAAGGAGTGGGGGTTACGCATGCTAACCAAGAAAGAAATAGAGGACTCGGAAGAGGCAACACTGGGAAATAAGAATCTGAGAAAAGATCGCCCTTTACTGGTCATTGATAATGTAGAGGAAAGCAACAACAAATTTGAGCCTAAAATCCAGCTTCCTTACAACTGGTTATTATCTGACGAAGATGAAGCCATGATTGATGAAACTAAGAGGAAAGAAATTGGTCTCTCTAATCTAGGCCTTTTGACAGCTTAG 2088 0.3798 MTSLAGSAGWDVSNKPEFEEIEKIVEAVIKKLGHKFSGSADDLIGIQPRLEALESLLKLSSKNDDEPGCWSRLWLYRDFQYVMMTEKKAIDAKAVILNQKVDDFKLNELRAEDLSKMEQLKMLILNHKNFSGRPSFLSNSLRYLLWNGYPFISLPSNFQPYHLVELNLPDSSIEQLWTDTQQLPYLKRMDLSNSKNLKMTPCFKGMQNLERLDLTGCINLWHLHSSIGLLTELQFLSLQNCSSLVCFDFGSESKLSSLRVLCLSGCTKLEITPDFRGLLNLEYLDMDLCTSLYTIHKSIGYLTKLKFLSLRGCINLVRIPDSFNDMTFLMTLDLCGCSKLTNLPLGSIFSSKTLQFFIFIDLSFCNISEVPDAIGELRGLERLNLQGNNFTGLPLTIQTLSSLSYLNLSHCHRLQVLPWTQTESGPSDSVGRYFKTKSGSRDHRSGLYVFDCPKLEEAYTVCQYTLFKWLKRLVKEPHHFRCGFDIILPWLWRDIPYWFDYRFKRGSIIRIKESNLQVDWLGFVFCILFVVNSYSVVSGSPHQSLSAPLPHPFYLSFESEYTEERFDMPLNLERNMVDGKNYLWTIYISQEHCHFVKTGARIRFKAGQGLIMKEWGLRMLTKKEIEDSEEATLGNKNLRKDRPLLVIDNVEESNNKFEPKIQLPYNWLLSDEDEAMIDETKRKEIGLSNLGLLTA 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01691 695 Gene3D Ribonuclease Inhibitor 351 457 IPR032675 -
Trre13g01691 695 Gene3D Ribonuclease Inhibitor 251 350 IPR032675 -
Trre13g01691 695 SUPERFAMILY L domain-like 111 419 - -
Trre13g01691 695 Pfam Leucine rich repeat 360 412 IPR001611 GO:0005515
Trre13g01691 695 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 255 344 IPR044974 GO:0006952
Trre13g01691 695 Gene3D Ribonuclease Inhibitor 92 249 IPR032675 -
Trre13g01691 695 Pfam C-JID domain 493 626 IPR045344 -
Trre13g01691 695 Pfam Leucine Rich Repeat 162 181 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01691 Trre-Chr13 13958994 13962440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01691 251 418 WRKY Transcription Factor Family AT4G12020 36.686 1.10e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01691 - - tpra:123891889 725.702