Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01652 ATGGAAAATATATGGCAGCATAAAATTCAAAAGTATGAAAAATTTGTTGATAAAAGCTTGAAACCTGATCTTCTTCATGCTACTGCTCATAGGGACAAGGTGTTCGAACAACAGAAAATTTTTGCTGATTTGCGAAGAAACATTGAAAACCTTGAGAAGAATAGTGTAACCAATCTGAAAACTTTGGTCAATATTGGGTCTTCTCGCCAGCTTGCAGTTGGCCCGGTAGCATTGGTTTCTCTGTTGGTCTCTAATGTTCTAGGCAGTGTAGCTGATTCATTCAGTGAAGTATACATAGAGTTGGCAATTTTACTGGCCCTTATGGTTGGGATACTGGAGTGCATATTGGGACTATTGAGGTATTTTTGCCATTCCTTATTTTCATCATCATACGTATAG 399 0.3784 MENIWQHKIQKYEKFVDKSLKPDLLHATAHRDKVFEQQKIFADLRRNIENLEKNSVTNLKTLVNIGSSRQLAVGPVALVSLLVSNVLGSVADSFSEVYIELAILLALMVGILECILGLLRYFCHSLFSSSYV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01652 132 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10 6 73 - -
Trre13g01652 132 Coils Coil 34 54 - -
Trre13g01652 132 Pfam Sulfate permease family 65 120 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01652 Trre-Chr13 13605179 13606008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01652 66 128 Inorganic Solute Cotransporters AT3G12520 63.768 8.55e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01652 K26537 - sly:101258456 108.227