Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01586 ATGGAAAGAGTGGCGGAGGAGGAGGAGGAAGTGAGAGTGAGGAATGAAGGTGCTTCTGTAATGCTTGCAGAGTTGGCATTGGAGGCTGGTTTACCTGAGGGTGTCTTAAATATTGTTCATGGAACCCATGATATTGTGAATGCCATTTGTGACGATGACGATATCAAAGCCATATCATTTGTTGGTTTGAATGTTGCTGGAATGCACATATATTCAAGAGCAGCTGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTATAAATGCATCAGTTTATTAA 327 0.4159 MERVAEEEEEVRVRNEGASVMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGLNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATINASVY 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01586 108 SUPERFAMILY ALDH-like 19 106 IPR016161 GO:0016491
Trre13g01586 108 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 13 108 IPR016162 GO:0016491
Trre13g01586 108 Pfam Aldehyde dehydrogenase family 19 107 IPR015590 GO:0016491
Trre13g01586 108 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 14 105 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01586 Trre-Chr13 12929415 12931065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01586 14 104 Aldehyde Dehydrogenase Gene Family AT2G14170 78.022 1.94e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01586 K00140 - gmx:100791508 164.851