Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01569 ATGTATGGCGCATCTACACGGCTATCAGATAGTTCTACACAAACTTTTGTATTCGATCCTGGTGAAGGTGACAACACCAAGCTTGAAATCCAGATTAAGTTAGATAACGAAAAGAAAATTATATCTATTAGAGATAGAGGTATTGGTATGACAAAGGAGGATTTAGTGAATAATTTGGGTACCATAGCTTTGGAACTTCAGGTGTGTTGCATCTTCTATGCGTATCAGTTCCGATTATGTGTGCTGCAGGATTCATTTTACTATTACTTGGTGGATTTTCTTAATAGCCACCACCGGAAATGCTTGGCCCAACATCATCTAATAAACTTAAAGAAGGCAGTAATTGCCACCCAATGTGCATGGAGAGGAAAAGTCGCTTGGCGAGAACTACGAAATCTCATATGGACTCAAATAGTAGTTATTAAAGTGAGTTCACTTTTGGACATTGTTAGAAGGAAAAATGTACGAAGTTTAGATACCTACACTAGCAGCACCTTATTGCTTATTATGGAAACTATGTTAAGGTTCTTCTTATTACAAGTTCACCCCATTCTCATTGCAGCATTGCATGAATATGACTGCCTACACATTATGATGCTCCTTTTGACATTTGTAGTTGTCAGCTCACCACTATATATGGATTATGAACTTATAGAGGCACGTGCTCGGTTTGACGAAGAATATCCTGATAAGACCAGTTTGGCATGGCCAATTGTTAAGGAATGTGAGGCAAATTTTACAATTATCAGGGTGTAA 756 0.3796 MYGASTRLSDSSTQTFVFDPGEGDNTKLEIQIKLDNEKKIISIRDRGIGMTKEDLVNNLGTIALELQVCCIFYAYQFRLCVLQDSFYYYLVDFLNSHHRKCLAQHHLINLKKAVIATQCAWRGKVAWRELRNLIWTQIVVIKVSSLLDIVRRKNVRSLDTYTSSTLLLIMETMLRFFLLQVHPILIAALHEYDCLHIMMLLLTFVVVSSPLYMDYELIEARARFDEEYPDKTSLAWPIVKECEANFTIIRV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01569 251 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 20 63 IPR036890 -
Trre13g01569 251 Gene3D - 6 65 IPR036890 -
Trre13g01569 251 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 23 63 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01569 Trre-Chr13 12736039 12740451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01569 94 190 Myosins gene family AT1G04600 34.021 6.98e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01569 K09487 - sind:105166069 81.2629