Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01508 ATGAAGCCGATGGGTACAGTTACAGGACGGAGGAGTATGTCGATGATATCCAAAACTGTCGCCGAAATAGTCGGAGTCAGCAAAACCAAGACACGCAAAGCTACAAGTGACCTCTGCACTTTCATGGGACTCTTATCATATGGAAAATATACGGCAGCATATAAAATTCAAAAGTATGAAGAATTTGTTGATAAAAGCTTGAAATCTGATCTTCTTCATGCTACTGCTCAGAGGGACAAGGTGTTCGAACAACAGAAAATTTTTGCTGATTTGCGAAGAAACATTGAAAACCTTGAGAAGAATAGTGTAACCAGTCTGAGAACTTTGGTCAATATTGGGTCTTCTCGCCAGCTTGCAGTTGGCCCGGTAGCATTGGTTTCTCTGTTGGTCTCTAATGTTCTAGGCAGTGTAGCTGATTCATTCAGTGAAGTATACATAGAGTTGGCAATTTTACTGGCCCTTATGGTTGGGATACTGGAGTGCATAATGGGACTATTGAGTTCCTTTCTGTAG 513 0.4152 MKPMGTVTGRRSMSMISKTVAEIVGVSKTKTRKATSDLCTFMGLLSYGKYTAAYKIQKYEEFVDKSLKSDLLHATAQRDKVFEQQKIFADLRRNIENLEKNSVTSLRTLVNIGSSRQLAVGPVALVSLLVSNVLGSVADSFSEVYIELAILLALMVGILECIMGLLSSFL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01508 170 Coils Coil 81 101 - -
Trre13g01508 170 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10 53 117 - -
Trre13g01508 170 Pfam Sulfate permease family 111 166 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01508 Trre-Chr13 12226030 12228256 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01508 113 166 Inorganic Solute Cotransporters AT3G12520 75.926 3.78e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01508 K26537 - gmx:100499907 104.76