Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01507 ATGGCAAGTCAACCTCGCCTCCAGGTCTTAGCTGCCAGCAAAAACAGAATTTCTACACTAAAGGGTTTTCCATATTTACCTGTTCTTGAGTTTTCATGGCCCCCTTTTGTATTGGGATCAGTTATGCTTGCAATACTTCTTGTCATGAAACACCTGGGAAAATCAAGGAAATACTTGCGATTCTTGAGAGCTGCAGGTCCTCTTACAGCAGTAGTCCTGGGAACACTCTTTGTAAAAATATTTCACCCACCATCAATTTCTTTGATGGCAAATAAAGCTACAGAAAAGGCTTCCAAGAATCATAAATTAAAACATCTCAAACGTTCAACTCAACAAATATCATCTCATGATGCAACTCCTCATACTATGCCATCAATTACTAGGACATCTAATAACACACATACTAATACTGCACCTCATATAAGGGAAAGCTTTGATGATGTCCGATGA 450 0.3889 MASQPRLQVLAASKNRISTLKGFPYLPVLEFSWPPFVLGSVMLAILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTLFVKIFHPPSISLMANKATEKASKNHKLKHLKRSTQQISSHDATPHTMPSITRTSNNTHTNTAPHIRESFDDVR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01507 149 Pfam Sulfate permease family 29 129 IPR011547 GO:0016020
Trre13g01507 149 MobiDBLite consensus disorder prediction 112 139 - -
Trre13g01507 149 MobiDBLite consensus disorder prediction 98 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01507 Trre-Chr13 12223360 12226003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01507 30 91 Inorganic Solute Cotransporters AT3G12520 62.903 1.55e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01507 K18059 - gmx:100794754 112.079