Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01501 ATGCCTAATATGCCTTCAAATGGCACAACAAACATGATGATGAACATGCAAATGAGTTTCTATTGGGGCAGAAAAGCCACAGTTCTTTTTTCTGGATGGCCTAATAACAATCTTGGAATGTATATCTTAGCTATTTTGTTTGTGTTCTTTCTAGCTATGGCTGCTGAGGTTTTGTCGAACCAACCACCTATCAAACGTGGGACTAATCCGCTCGTCGGGTTTTTTGTGACGCGGTCGCGTGCTATTGCTGTTGCTAATGGGGAAGATCAACAATCCTTGTCTGATACAATCAAAATTTGA 300 0.41 MPNMPSNGTTNMMMNMQMSFYWGRKATVLFSGWPNNNLGMYILAILFVFFLAMAAEVLSNQPPIKRGTNPLVGFFVTRSRAIAVANGEDQQSLSDTIKI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01501 99 Pfam Ctr copper transporter family 18 59 IPR007274 GO:0005375|GO:0016020|GO:0035434
Trre13g01501 99 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 9 59 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01501 Trre-Chr13 12159343 12159762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01501 19 68 Inorganic Solute Cotransporters AT5G59030 46.000 8.71e-12 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01501 K14686 - gmx:100808693 97.4413