Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01497 ATGGCTACAAATCAGGAAGAGGTGAAACTTTTGGGAGTTGATGGAAGCCCATTTGTGTGTAGGGTAAAGATTGCTCTAAAGTTGAAGGGAATTGAATACAAATTTGTTGAAGAAAACTTGGCCAACAAAAGTGAACAACTCCTCAAATACAATCCAGTTTATAAAAAGGTTCCAGTTTTTGTTCATAATGAAAAGCCTATCTCAGAATCTCTAGTGATTCTTGAGTATATTGATGAGATTTGGAAACAAAATCCCATTTTGCCTTCTGATCCATACCAAAAATCGTTGGCTCGATTTTGGGCCAAGTTCATTGACGACAAGATCGTGACTTCATCGTTTAAAGCTGTTTTTGCTGTTAACGATGAGAAAGAGCGTGAGAAGAATGTCGAAGAATCATCTGAGAGTCTTCAGATACTTGAAAATGAGCTGAAAGGAAAGTTCTTTGGGGGAGAAGAGATTAACTTTGTGGATATTGCTGCTGTGTTCATTGCTTTTTGGATCCCTTTGGTTCAAGACATTACTGATTTGAAATTGTTCACTAATGAAAAGTATCCAAAGCTTTACAATTGGAGTCAAGAATTGCTTAACCATCCTGTTGTGAAGGAGAATCTGCCTCCTAGAGATCCTCTTTTCGCCTTTTTTAAAGGTCGCTACGATAGCCTTCTTGCTGCTTCAAAATAG 681 0.3774 MATNQEEVKLLGVDGSPFVCRVKIALKLKGIEYKFVEENLANKSEQLLKYNPVYKKVPVFVHNEKPISESLVILEYIDEIWKQNPILPSDPYQKSLARFWAKFIDDKIVTSSFKAVFAVNDEKEREKNVEESSESLQILENELKGKFFGGEEINFVDIAAVFIAFWIPLVQDITDLKLFTNEKYPKLYNWSQELLNHPVVKENLPPRDPLFAFFKGRYDSLLAASK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01497 226 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Trre13g01497 226 Gene3D - 90 225 - -
Trre13g01497 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 222 IPR010987 -
Trre13g01497 226 CDD GST_N_Tau 8 81 - -
Trre13g01497 226 Gene3D Glutaredoxin 1 89 - -
Trre13g01497 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 208 IPR045073 -
Trre13g01497 226 Pfam Glutathione S-transferase, C-terminal domain 115 198 IPR004046 -
Trre13g01497 226 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Trre13g01497 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Trre13g01497 226 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Trre13g01497 226 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Trre13g01497 226 Coils Coil 122 142 - -
Trre13g01497 226 FunFam Glutathione S-transferase GSTU6 3 87 - -
Trre13g01497 226 FunFam Tau class glutathione S-transferase 87 224 - -
Trre13g01497 226 SFLD Glutathione Transferase (cytosolic) 4 224 IPR040079 -
Trre13g01497 226 SFLD Main.3: Omega- and Tau-like 4 224 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01497 Trre-Chr13 12089453 12090497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01497 3 221 Glutathione S-transferase Gene Family AT2G29420 48.636 6.46e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01497 K00799 - gmx:100806714 363.614