Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01495 ATGATTGCAATAAAGAAGGCTGTGACTACTTCAAGCCTCTTCATGGTTGCTGATCAAATAATTTCTGCTCACGAATCCCTTGTGATTCTTGAGTATATTGATGAAACATGGAAACAAAATCCCATCTTTCCTTCTAATCCATACCAAAGAGCCTTAGCTCGATTTTGGTCAAAGTTCATCGACGACAAGATTGTGGCTGCTACCGTTAAAGTTATTCATATCGTTGATGATGAGAAAGAGCGCGAGAAGAATGTTGAGGAATCAATTGAGGCTTTACAGATTCTTGAGAATGAGTTGAAGGACAAGTTTTTTGGAGGAGAAGAGATTGGTATTGTGGATATTGCTGCTGTTTTTATAGCTTTTTGGCTTCCTTTGATTCAAGACATAAAAAGGTTGCAATTTGTGACTGTTGAAAAGTTTCCAAAACTTTACAATTGGAGTCAAGAATTTCTCAACCATCCAATTGTTAAGGAAAATATCCCTCCTAGAGACCCTCTTTTTGCCTCCTACAAAGCTTACTATGATAGCCTCATTGCTTCAAAATAG 546 0.3736 MIAIKKAVTTSSLFMVADQIISAHESLVILEYIDETWKQNPIFPSNPYQRALARFWSKFIDDKIVAATVKVIHIVDDEKEREKNVEESIEALQILENELKDKFFGGEEIGIVDIAAVFIAFWLPLIQDIKRLQFVTVEKFPKLYNWSQEFLNHPIVKENIPPRDPLFASYKAYYDSLIASK 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01495 181 CDD GST_C_Tau 47 173 IPR045074 GO:0004364|GO:0006749
Trre13g01495 181 FunFam Tau class glutathione S-transferase 43 180 - -
Trre13g01495 181 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 46 174 IPR010987 -
Trre13g01495 181 Pfam Glutathione S-transferase, C-terminal domain 70 154 IPR004046 -
Trre13g01495 181 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 24 164 IPR045073 -
Trre13g01495 181 Coils Coil 75 102 - -
Trre13g01495 181 Gene3D Glutaredoxin 4 45 - -
Trre13g01495 181 Gene3D - 46 181 - -
Trre13g01495 181 SUPERFAMILY GST C-terminal domain-like 35 175 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01495 Trre-Chr13 12085159 12088340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01495 22 180 Glutathione S-transferase Gene Family AT3G09270 47.826 8.33e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01495 K00799 - gmx:547578 242.276