Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01492 ATGGCTACAAATCAGGAAGATGTGAAACTTTTGGGAGCAACAGGAAGCCCATTTGTGTGCAGAGTAAGGATTGCTCTAAAATTGAAGGAAATTGAATACAAATATGTTGAAGAAAATTTGGGCAATAAAAGTGATGAACTCATCAAGTATAACCCAGTTTATAAAAAGGTTCCAGTTTTTGTTCATCATGATAAGCCCATATCAGAATCACTTGTCATTCTTGAGTACATTGATGAGATTTGGAAACAAAATCCAATCTTGTCTAATGATCCTTATCAAAGATCCTTGGCTCGTTTCTGGTCCAAGTTCATAGATGATAAGATTGTGGGTGCTTCATTTAAATCTGTTTTCACAATCGATGAGACAGAGCGCGAGAAGCATATCGAAGAATCAACTGAGGCTCTAAAGATTCTTGAGAATGAGCTGAAGGGAAAGTTCTTTGGAGGAGAAGAGATTAACTTTGTGGATATTGCTGCTGTCTTCATTGCTTTTTGGATCCCTTTGGTTCAAGACATTACTGACTTGAAATTGTTCACTGATGAAAAGTTTCCAAAGCTTTACAATTGGAGTCAAGATTTTCTCAACCATCCAGTTGTGAAGGAGAGTCTGCCTCCTAGAGACCCTCTTTTCGCCTTTTTTAAAGGTCGCTACGATGGCCTTGTTGCTGCTTCAAAATAG 678 0.3805 MATNQEDVKLLGATGSPFVCRVRIALKLKEIEYKYVEENLGNKSDELIKYNPVYKKVPVFVHHDKPISESLVILEYIDEIWKQNPILSNDPYQRSLARFWSKFIDDKIVGASFKSVFTIDETEREKHIEESTEALKILENELKGKFFGGEEINFVDIAAVFIAFWIPLVQDITDLKLFTDEKFPKLYNWSQDFLNHPVVKESLPPRDPLFAFFKGRYDGLVAASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01492 225 FunFam Tau class glutathione S-transferase 87 223 - -
Trre13g01492 225 Gene3D Glutaredoxin 1 89 - -
Trre13g01492 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Trre13g01492 225 CDD GST_N_Tau 8 81 - -
Trre13g01492 225 FunFam Glutathione S-transferase GSTU6 3 87 - -
Trre13g01492 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Trre13g01492 225 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Trre13g01492 225 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Trre13g01492 225 SFLD Glutathione Transferase (cytosolic) 4 221 IPR040079 -
Trre13g01492 225 Gene3D - 90 224 - -
Trre13g01492 225 SFLD Main.3: Omega- and Tau-like 4 221 IPR045073 -
Trre13g01492 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Trre13g01492 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Trre13g01492 225 Pfam Glutathione S-transferase, C-terminal domain 118 197 IPR004046 -
Trre13g01492 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01492 Trre-Chr13 12075647 12076597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01492 3 222 Glutathione S-transferase Gene Family AT3G09270 48.879 2.25e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01492 K00799 - gmx:100806714 355.91