Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01490 ATGATTCATATGTTAGTTGCCAAAGTTAAGAGAGTGTTACAAGGCTGGGGTGCTATTGCTGCATCTGAGGAAGAGGTGAAGCTTTATGGTTCTGTGGGAAGCCCATTTGTAATAAGAGTTCAAATTGCCCTGAAATTGAAGGGTATTGAATACAAATATATGGAAGAAAAATTGGGTAATTTGAGTGAAACACTTCTAAAATACAATCCAGTTTACAGGATGGTTCCTGTTTTTGTTCATAATGGGAAGCCTATCTCCGAATCTCGTGTGATTCTTGAGTATATTAATGAAACTTGGAAGCAAAATCCTATCTTGCCTAATGATCCTTATCAAAGAGCATTATCTCGATTTTGGTCTAAGTTCATCGATGACAAGTGTGTTGCTGCTGCATGGAAATCTGTTTTTATGCCGAATGAGAAAGAACGTTCTCAAGCTAGTAAAGAATTATCGGAGGCTTTGCAGTTTCTTGAGAATGAGTTGAAAGACAAGTTCTTTGGAGGACAAGAGATTGGTTTTGTGGATATTGCTGCTCTCTTCATCCCTTTATTCCAAGAAGTAGCAGAGTTTCAGTTGTTCACAAGTGACAAATTTCCTAAGCTATACAAATGGAGCCAAGAATTTTACAACCATCCAATAGTAAAGGAAATTATGCCTTCAAAAGATCAACAATTTGCTTATTTCAAAGCTCGTGCCGAAAGCATTGCTGCTCCATCAAAATAG 720 0.3736 MIHMLVAKVKRVLQGWGAIAASEEEVKLYGSVGSPFVIRVQIALKLKGIEYKYMEEKLGNLSETLLKYNPVYRMVPVFVHNGKPISESRVILEYINETWKQNPILPNDPYQRALSRFWSKFIDDKCVAAAWKSVFMPNEKERSQASKELSEALQFLENELKDKFFGGQEIGFVDIAALFIPLFQEVAEFQLFTSDKFPKLYKWSQEFYNHPIVKEIMPSKDQQFAYFKARAESIAAPSK 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01490 239 Gene3D Glutaredoxin 19 107 - -
Trre13g01490 239 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 103 IPR004045 -
Trre13g01490 239 FunFam Tau class glutathione S-transferase 105 237 - -
Trre13g01490 239 Gene3D - 108 237 - -
Trre13g01490 239 FunFam Tau class glutathione S-transferase 20 107 - -
Trre13g01490 239 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 108 227 IPR010987 -
Trre13g01490 239 SFLD Main.3: Omega- and Tau-like 23 237 IPR045073 -
Trre13g01490 239 CDD GST_N_Tau 26 99 - -
Trre13g01490 239 SFLD Main (cytGST) 23 237 - -
Trre13g01490 239 Pfam Glutathione S-transferase, N-terminal domain 25 96 IPR004045 -
Trre13g01490 239 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 30 222 IPR045073 -
Trre13g01490 239 SUPERFAMILY Thioredoxin-like 25 126 IPR036249 -
Trre13g01490 239 CDD GST_C_Tau 109 230 IPR045074 GO:0004364|GO:0006749
Trre13g01490 239 Pfam Glutathione S-transferase, C-terminal domain 126 211 IPR004046 -
Trre13g01490 239 SUPERFAMILY GST C-terminal domain-like 97 232 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01490 Trre-Chr13 12071756 12072682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01490 23 236 Glutathione S-transferase Gene Family AT3G09270 50.226 1.84e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01490 K00799 - gmx:548029 333.954