Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01489 ATGATTCATGTATTAGTTGCCAAAGTCAAGAGAGTGTTACAAGGCTGTGGTGCTATAGCTACAAATCAGGAAGATGTGAAACTTTTGGGAGCAACAGGAAGCCCATTTGTGTGCAGAGTAAGGATTGCTCTAAAATTGAAGGAAATTGAATACAAATATGTTGAAGAAAATTTGGTTAATAAAAGTGATGAACTCATCAAATATAACCCAGTTTACAAAAAGGTTCCAGTTTTTGTTCATAATGATAAGCCCATATCAGAATCACTTGTTATTCTTGAGTACATTGATGAGATTTGGAAACAAAATCCAATCTTGTCAAATGATCCTTATCAAAGGGCATTGGTTCGTTTCTGGTCCAAGTTCATAGATGATAAGATTGTGGCAACTTCATTTAAATCGGTTTTTACGGTTGATAAGAAAGAGCGCGAGAAGAATATTGAAGAATCAACTGAGGCACTTCAGTTTCTTGAGAATGAGCTGAAGGGAAAGTTCTTTGGAGGAGAAGAGATTAACTTTGTGGATATTGCTGCTGTCTTCATTGCTTTTTGGATCCCTTTGGTTCAAGACATTACTGACTTGAAATTGTTCACTGATAAAAAGTTTCCGAAGCTTTACAATTGGAGTCAAGAATTTCTCAACCATCCTGTTGTGAAGGAGAATTTGCCTCCTAGAGACCCTCTTTTTGCCTTTTTTAAAGCTCGCTACGATGGCCTTCTTGCTGCTTCAAAATAG 732 0.3675 MIHVLVAKVKRVLQGCGAIATNQEDVKLLGATGSPFVCRVRIALKLKEIEYKYVEENLVNKSDELIKYNPVYKKVPVFVHNDKPISESLVILEYIDEIWKQNPILSNDPYQRALVRFWSKFIDDKIVATSFKSVFTVDKKEREKNIEESTEALQFLENELKGKFFGGEEINFVDIAAVFIAFWIPLVQDITDLKLFTDKKFPKLYNWSQEFLNHPVVKENLPPRDPLFAFFKARYDGLLAASK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01489 243 Pfam Glutathione S-transferase, N-terminal domain 25 97 IPR004045 -
Trre13g01489 243 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 24 103 IPR004045 -
Trre13g01489 243 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 108 230 IPR010987 -
Trre13g01489 243 Gene3D - 108 242 - -
Trre13g01489 243 CDD GST_C_Tau 109 234 IPR045074 GO:0004364|GO:0006749
Trre13g01489 243 Pfam Glutathione S-transferase, C-terminal domain 136 215 IPR004046 -
Trre13g01489 243 SFLD Main.3: Omega- and Tau-like 22 241 IPR045073 -
Trre13g01489 243 Coils Coil 139 159 - -
Trre13g01489 243 SUPERFAMILY Thioredoxin-like 25 126 IPR036249 -
Trre13g01489 243 CDD GST_N_Tau 26 99 - -
Trre13g01489 243 FunFam Tau class glutathione S-transferase 105 241 - -
Trre13g01489 243 SFLD Main (cytGST) 22 241 - -
Trre13g01489 243 SUPERFAMILY GST C-terminal domain-like 97 236 IPR036282 -
Trre13g01489 243 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 28 225 IPR045073 -
Trre13g01489 243 Gene3D Glutaredoxin 19 107 - -
Trre13g01489 243 FunFam Tau class glutathione S-transferase 20 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01489 Trre-Chr13 12068744 12069943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01489 21 238 Glutathione S-transferase Gene Family AT2G29420 47.489 1.84e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01489 K00799 - gmx:100806714 363.614