Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01488 ATGGCATCAAATCAGGAAGAGGTGAAGCTTTATGGAATAGTGGGAAGTCCATTTGTAACAAGGGTGGACATAGCTCTAAATTTGAAGGGAGTTGAATACAAATTTGTGGAAGAAAAGCAGGGAAATTTTAGTGATGCACTAATCAAGTATAACCCTGTTTATAAGAAAGTTCCTGTATTAGTTCATAATGATAAACCCATATCTGAGTCACTTGTGATCCTTGAGTACATTGATGATGCTTGGAAACAAAATCCATTCTTGCCTTCTGATCCTTACAAAAGAGCCTTAGCCCGTTTTTGGTCCAAGTTTATAGATGATAAGTGTTTGAATGCTGCAAGAAAATTTGCTTTTTCTCCTGATGAGAAAGAACGAGAGGAGGGTTTTAAGGAATTAGAAGTGGCTTTTCAATTTCTTGAGGATGAGCTTAAGGACAAATATTTTGGTGGAGAAGAGATTGGCCTTGTTGATATTACAGGTGTCTTCATAGCTTTTTGGGTCCCTATTTTGGAAGAAGTAATAGGATTGGAGTTGCTCACTAATGAGAAATTTCCAAAGCTTTACAAATGGAGTCAAGACTTCACCAATCACCAAGTTGTTAAGGAAAAACTACCTAATAGAGAAGCACAATTGGCCTATTTCAAAGCTCGTTATGAAAGTCTTTTTGCTTCAAAATAG 675 0.3659 MASNQEEVKLYGIVGSPFVTRVDIALNLKGVEYKFVEEKQGNFSDALIKYNPVYKKVPVLVHNDKPISESLVILEYIDDAWKQNPFLPSDPYKRALARFWSKFIDDKCLNAARKFAFSPDEKEREEGFKELEVAFQFLEDELKDKYFGGEEIGLVDITGVFIAFWVPILEEVIGLELLTNEKFPKLYKWSQDFTNHQVVKEKLPNREAQLAYFKARYESLFASK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01488 224 Gene3D - 90 224 - -
Trre13g01488 224 FunFam Glutathione S-transferase GSTU6 3 87 - -
Trre13g01488 224 CDD GST_N_Tau 8 81 - -
Trre13g01488 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Trre13g01488 224 SFLD Main.3: Omega- and Tau-like 4 220 IPR045073 -
Trre13g01488 224 SFLD Glutathione Transferase (cytosolic) 4 220 IPR040079 -
Trre13g01488 224 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Trre13g01488 224 Gene3D Glutaredoxin 1 89 - -
Trre13g01488 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Trre13g01488 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 207 IPR045073 -
Trre13g01488 224 FunFam Tau class glutathione S-transferase 87 223 - -
Trre13g01488 224 Pfam Glutathione S-transferase, C-terminal domain 114 195 IPR004046 -
Trre13g01488 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Trre13g01488 224 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Trre13g01488 224 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01488 Trre-Chr13 12057599 12058839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01488 4 223 Glutathione S-transferase Gene Family AT3G09270 50.000 2.10e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01488 K00799 - gmx:100527851 312.383