Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01486 ATGGCATCAAATCAGGAAGAAGAGTTAAAGCTTTTTGGAATGGTGGGAAGTCCAATTGTAGTAAGGGTGGACATAGCTCTAAATTTGAAGGGAGTTGAATACAAATTTGTTGAAGAAAAAAAAGGAAATTTTAGTGATACAGTAATCAAATACAACCCTATTTATAAAAAAGTCCCAGTATTAGTTCATAATGATAAACCCATATCCGAGTCACTTGTGATCCTTGAATATATTGATGAGATTTGGAAACAAAATCCAATCTTACCTTCTGATCCTCACAAAAGAGCTTTGGCTCGTTTCTTGTCCAAGTTTATAGATGATAAGTGTTTGAATGCTGCAAGCAAAGTTGTTTTTTCTCTTGATGAGAAAGAACGAGAGGAGGGTATTAAGGAATTAGAAGTGGTTTTTCAATTTCTTGAGAATGAGCTCAAGGACAAATTCTTTGGTGGAGAAGAGATTGGCCTTGTTGATATTACAGGTGTCTTCGTAGCTTTTTGGGTCCCTATTATACAAGAAGCAATGGGATTGAAGTTGTTCACTGTTGAGAAATTTCCAAAGCTTTGCAAATGGAGTCAAGACTTCAACAATCACCATATTGTCAAAGAAAAATTACCTAATAGAGAAACACAATTGGCTTTCTTCAAAGCTCGTTATGAAAGTCTTGTTGCTTCAAAATAG 678 0.3496 MASNQEEELKLFGMVGSPIVVRVDIALNLKGVEYKFVEEKKGNFSDTVIKYNPIYKKVPVLVHNDKPISESLVILEYIDEIWKQNPILPSDPHKRALARFLSKFIDDKCLNAASKVVFSLDEKEREEGIKELEVVFQFLENELKDKFFGGEEIGLVDITGVFVAFWVPIIQEAMGLKLFTVEKFPKLCKWSQDFNNHHIVKEKLPNRETQLAFFKARYESLVASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01486 225 SFLD Main (cytGST) 5 223 - -
Trre13g01486 225 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Trre13g01486 225 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Trre13g01486 225 Gene3D - 91 225 - -
Trre13g01486 225 FunFam Tau class glutathione S-transferase 88 224 - -
Trre13g01486 225 SFLD Main.3: Omega- and Tau-like 5 223 IPR045073 -
Trre13g01486 225 CDD GST_N_Tau 9 82 - -
Trre13g01486 225 Pfam Glutathione S-transferase, C-terminal domain 120 196 IPR004046 -
Trre13g01486 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Trre13g01486 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 213 IPR010987 -
Trre13g01486 225 Gene3D Glutaredoxin 2 90 - -
Trre13g01486 225 FunFam Glutathione S-transferase GSTU6 4 88 - -
Trre13g01486 225 SUPERFAMILY GST C-terminal domain-like 80 219 IPR036282 -
Trre13g01486 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 208 IPR045073 -
Trre13g01486 225 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01486 Trre-Chr13 12037345 12042551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01486 4 224 Glutathione S-transferase Gene Family AT3G09270 48.661 1.78e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01486 K00799 - gmx:100527851 299.286