Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01485 ATGGCATCAAATCAGGAAGAAGAGGTTCAGCTTTTTGGAGTGGTGCCAAGTCCATTTGTAACTAGAGTTGACATAGCTCTAAATTTGAAAGGAATTGAATACAAATTTGTGGAAGAAAAGTTAGGAAATTTTAGTGATATACTAATCAAATACAACCCTATTCATAAGAAAGTTCCTGTATTAGTTCATAATGGAAAATCCATATTAGAATCTCGTGTGATTCTTGAGTATATTGATGACACTTGGAATCAAAATCCAATCTTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTTTGGTCCAATTTCATAGATGATAAGTTTTTGGGTGCTCTACGGAAATTGGCTTCTTCTCTTAGAGCGAAAGAAAGCATCCAAGAGAGCATTGAGGAACTAGAAGTGGTTTTTCAATTTCTTGAAAATGAGCTCAATGAAAAGTTCTTTGGTGGTGAAGAGATTGGCATTGTTGATATTACAGGTGTCTACATAGCTTTTTGGTTCCCTGTTATGCAAGAAGTATCAGGATTGAAAGTATTCACCAATGAGAAATATCCCAAACTTTACAAATGGAGTCAAGACTTGACCAATTACCAAGTTGTTAAGGAAAAATTACCTAACAGAGAAACATTGTTGTCCTACTTCAGAGCTCGTTATGAAAGTCTTGTTGCTTCAAAATAA 681 0.3524 MASNQEEEVQLFGVVPSPFVTRVDIALNLKGIEYKFVEEKLGNFSDILIKYNPIHKKVPVLVHNGKSILESRVILEYIDDTWNQNPILPSDPYKRALARFWSNFIDDKFLGALRKLASSLRAKESIQESIEELEVVFQFLENELNEKFFGGEEIGIVDITGVYIAFWFPVMQEVSGLKVFTNEKYPKLYKWSQDLTNYQVVKEKLPNRETLLSYFRARYESLVASK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01485 226 SUPERFAMILY Thioredoxin-like 9 109 IPR036249 -
Trre13g01485 226 SFLD Glutathione Transferase (cytosolic) 5 224 IPR040079 -
Trre13g01485 226 SFLD Main.3: Omega- and Tau-like 5 224 IPR045073 -
Trre13g01485 226 FunFam Glutathione S-transferase GSTU6 4 88 - -
Trre13g01485 226 Gene3D Glutaredoxin 2 90 - -
Trre13g01485 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 221 IPR010987 -
Trre13g01485 226 SUPERFAMILY GST C-terminal domain-like 80 220 IPR036282 -
Trre13g01485 226 CDD GST_C_Tau 92 218 IPR045074 GO:0004364|GO:0006749
Trre13g01485 226 CDD GST_N_Tau 9 82 - -
Trre13g01485 226 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Trre13g01485 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 211 IPR045073 -
Trre13g01485 226 Coils Coil 123 143 - -
Trre13g01485 226 FunFam Tau class glutathione S-transferase 88 225 - -
Trre13g01485 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Trre13g01485 226 Gene3D - 91 226 - -
Trre13g01485 226 Pfam Glutathione S-transferase, C-terminal domain 121 195 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01485 Trre-Chr13 12033485 12034453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01485 4 225 Glutathione S-transferase Gene Family AT3G09270 48.684 3.27e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01485 K00799 - gmx:100527851 289.656