Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre13g01485 | ATGGCATCAAATCAGGAAGAAGAGGTTCAGCTTTTTGGAGTGGTGCCAAGTCCATTTGTAACTAGAGTTGACATAGCTCTAAATTTGAAAGGAATTGAATACAAATTTGTGGAAGAAAAGTTAGGAAATTTTAGTGATATACTAATCAAATACAACCCTATTCATAAGAAAGTTCCTGTATTAGTTCATAATGGAAAATCCATATTAGAATCTCGTGTGATTCTTGAGTATATTGATGACACTTGGAATCAAAATCCAATCTTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTTTGGTCCAATTTCATAGATGATAAGTTTTTGGGTGCTCTACGGAAATTGGCTTCTTCTCTTAGAGCGAAAGAAAGCATCCAAGAGAGCATTGAGGAACTAGAAGTGGTTTTTCAATTTCTTGAAAATGAGCTCAATGAAAAGTTCTTTGGTGGTGAAGAGATTGGCATTGTTGATATTACAGGTGTCTACATAGCTTTTTGGTTCCCTGTTATGCAAGAAGTATCAGGATTGAAAGTATTCACCAATGAGAAATATCCCAAACTTTACAAATGGAGTCAAGACTTGACCAATTACCAAGTTGTTAAGGAAAAATTACCTAACAGAGAAACATTGTTGTCCTACTTCAGAGCTCGTTATGAAAGTCTTGTTGCTTCAAAATAA | 681 | 0.3524 | MASNQEEEVQLFGVVPSPFVTRVDIALNLKGIEYKFVEEKLGNFSDILIKYNPIHKKVPVLVHNGKSILESRVILEYIDDTWNQNPILPSDPYKRALARFWSNFIDDKFLGALRKLASSLRAKESIQESIEELEVVFQFLENELNEKFFGGEEIGIVDITGVYIAFWFPVMQEVSGLKVFTNEKYPKLYKWSQDLTNYQVVKEKLPNRETLLSYFRARYESLVASK | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre13g01485 | 226 | SUPERFAMILY | Thioredoxin-like | 9 | 109 | IPR036249 | - | |
Trre13g01485 | 226 | SFLD | Glutathione Transferase (cytosolic) | 5 | 224 | IPR040079 | - | |
Trre13g01485 | 226 | SFLD | Main.3: Omega- and Tau-like | 5 | 224 | IPR045073 | - | |
Trre13g01485 | 226 | FunFam | Glutathione S-transferase GSTU6 | 4 | 88 | - | - | |
Trre13g01485 | 226 | Gene3D | Glutaredoxin | 2 | 90 | - | - | |
Trre13g01485 | 226 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 91 | 221 | IPR010987 | - | |
Trre13g01485 | 226 | SUPERFAMILY | GST C-terminal domain-like | 80 | 220 | IPR036282 | - | |
Trre13g01485 | 226 | CDD | GST_C_Tau | 92 | 218 | IPR045074 | GO:0004364|GO:0006749 | |
Trre13g01485 | 226 | CDD | GST_N_Tau | 9 | 82 | - | - | |
Trre13g01485 | 226 | Pfam | Glutathione S-transferase, N-terminal domain | 8 | 79 | IPR004045 | - | |
Trre13g01485 | 226 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 12 | 211 | IPR045073 | - | |
Trre13g01485 | 226 | Coils | Coil | 123 | 143 | - | - | |
Trre13g01485 | 226 | FunFam | Tau class glutathione S-transferase | 88 | 225 | - | - | |
Trre13g01485 | 226 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 7 | 86 | IPR004045 | - | |
Trre13g01485 | 226 | Gene3D | - | 91 | 226 | - | - | |
Trre13g01485 | 226 | Pfam | Glutathione S-transferase, C-terminal domain | 121 | 195 | IPR004046 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre13g01485 | Trre-Chr13 | 12033485 | 12034453 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre13g01485 | 4 | 225 | Glutathione S-transferase Gene Family | AT3G09270 | 48.684 | 3.27e-71 | 215 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre13g01485 | K00799 | - | gmx:100527851 | 289.656 |