Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01483 ATGGCATCAAATAAGGAAGAAGTTAAGCTTTTCGGAATGGCAAGTCCATTTGTAAGCAGAGTGGAGATTGCTCTAAAATTGAAGGGAATTGAATACAAATATGAACAAGAAAAATGGGGGAACTTGAGTGATACACTAATCAAATATAACCCTATTTATAAGAAAGTTCCTGTATTAGTTCATAATGGCAAACCCATTTCAGAATCACTTGTGATTGTTGAATATATTGATGAAACTTGGAAACAAAATCCAATTTTGCCTTCTGATCCTTACAAAAGAGCTTCGGTTCGGTTTTGGTCCAATTTCATAGATGACAAGTATATGAATGCTCTACGGAAAGTTCTTTACACTGTTGATGAAAAAGAACGTGAAAAGAGTATTGAGGAATCAGAAGTGGCTCTTCAATTTCTTGAGAATGAACTTAAGGACAAATTCTTTGGTGGAGAAGATATTGGCCTTGTTGACATTACTGCATGTTTCATAGCTTTTTGGCTCCCTGTTTTACAAGAAGTAATGGGACTAAAGTTGTTGAAGAATGAGAAATTTCCAAAGCTTTACAAATGGAGTCAAGACTTCAACAATCATCCAATTGTCAAAGAAAAATTACCTCCTAGAGGAACCCTTTTGGCCTTCTACAAAGCTCATTTTGCCTCCTAG 657 0.3546 MASNKEEVKLFGMASPFVSRVEIALKLKGIEYKYEQEKWGNLSDTLIKYNPIYKKVPVLVHNGKPISESLVIVEYIDETWKQNPILPSDPYKRASVRFWSNFIDDKYMNALRKVLYTVDEKEREKSIEESEVALQFLENELKDKFFGGEDIGLVDITACFIAFWLPVLQEVMGLKLLKNEKFPKLYKWSQDFNNHPIVKEKLPPRGTLLAFYKAHFAS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01483 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 216 IPR010987 -
Trre13g01483 218 Gene3D Glutaredoxin 1 88 - -
Trre13g01483 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Trre13g01483 218 Coils Coil 120 140 - -
Trre13g01483 218 CDD GST_N_Tau 8 80 - -
Trre13g01483 218 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Trre13g01483 218 Pfam Glutathione S-transferase, C-terminal domain 117 196 IPR004046 -
Trre13g01483 218 SFLD Main.3: Omega- and Tau-like 4 216 IPR045073 -
Trre13g01483 218 CDD GST_C_Tau 90 214 IPR045074 GO:0004364|GO:0006749
Trre13g01483 218 SUPERFAMILY GST C-terminal domain-like 78 216 IPR036282 -
Trre13g01483 218 FunFam Tau class glutathione S-transferase 86 218 - -
Trre13g01483 218 SFLD Glutathione Transferase (cytosolic) 4 216 IPR040079 -
Trre13g01483 218 FunFam Tau class glutathione S-transferase 1 88 - -
Trre13g01483 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 13 205 IPR045073 -
Trre13g01483 218 Gene3D - 89 218 - -
Trre13g01483 218 SUPERFAMILY Thioredoxin-like 10 107 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01483 Trre-Chr13 12025929 12027182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01483 3 218 Glutathione S-transferase Gene Family AT3G09270 53.636 3.87e-76 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01483 K00799 - gmx:547578 309.301