Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01479 ATGGCATCAAATAAGGAAGCGGTAAAGCTTTTTGGAATGGTGCAAAGTCCATTTGTGACAAGGGTGGAGATTGCTCTAAAATTGAAGGGAGTTGAATACAAATATGAAGAAGAAAAGTGGGGGAACTTTAGTGATACACTCATCAAATATAACCCAATTTATAAAAAGGTTCCAGTTTTTGTTCACAATGACAAGCACTTATCAGAATCACTTGTGATTCTTGAGTACATTGATGAAACCTGGAAACAAAATCCTATTTTGCCTTCTGATCCTTACAAAAGAGCCTTGGCTCGTTTATGGTCCAATTTCATTGATGACAAGTGTTTGAATGGTGTACGCAAAGCTGTTTTCACTCTTGATGAAAAAGAACAAGAGAAGAGTATTGAGGAAATAGAAGTAGTTCTTCAATTTTTTGAGAATGAGCTCAAGGATAAATTCTTTGGTGGACAGAAGATTGGCCTTGTTGACATTAGTGCTGTGTTTATAGCCTTTTGGCTCCCAATTATACAAGAGGTAAAAGGAATAAAGTTGTTCAACTTTGAGAAATTTCCCAAGCTTTACAATTGGAGTCAAGACTTCAATAACCATCCAATTGTTAAAGAAAAATTGCCTACTAGAGAAACCCTTTTGGCCTTCTACAATGTAGTGTTGCTTCAAAAATAG 663 0.3575 MASNKEAVKLFGMVQSPFVTRVEIALKLKGVEYKYEEEKWGNFSDTLIKYNPIYKKVPVFVHNDKHLSESLVILEYIDETWKQNPILPSDPYKRALARLWSNFIDDKCLNGVRKAVFTLDEKEQEKSIEEIEVVLQFFENELKDKFFGGQKIGLVDISAVFIAFWLPIIQEVKGIKLFNFEKFPKLYNWSQDFNNHPIVKEKLPTRETLLAFYNVVLLQK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01479 220 Coils Coil 121 141 - -
Trre13g01479 220 SFLD Glutathione Transferase (cytosolic) 4 214 IPR040079 -
Trre13g01479 220 SUPERFAMILY GST C-terminal domain-like 79 215 IPR036282 -
Trre13g01479 220 CDD GST_N_Tau 8 81 - -
Trre13g01479 220 FunFam Tau class glutathione S-transferase 87 219 - -
Trre13g01479 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Trre13g01479 220 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Trre13g01479 220 Gene3D Glutaredoxin 1 89 - -
Trre13g01479 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 208 IPR045073 -
Trre13g01479 220 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Trre13g01479 220 FunFam Tau class glutathione S-transferase 1 89 - -
Trre13g01479 220 CDD GST_C_Tau 91 215 IPR045074 GO:0004364|GO:0006749
Trre13g01479 220 Pfam Glutathione S-transferase, C-terminal domain 118 197 IPR004046 -
Trre13g01479 220 SFLD Main.3: Omega- and Tau-like 4 214 IPR045073 -
Trre13g01479 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Trre13g01479 220 Gene3D - 90 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01479 Trre-Chr13 11989350 11990717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01479 3 211 Glutathione S-transferase Gene Family AT3G09270 50.943 6.92e-70 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01479 K00799 - gmx:547578 295.819