Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01478 ATGGCATCTAATCAGGAAGAGGTGAAGCTTTTTGGATTAGTGGAAAGCCCATATGTAACAAGGGTAGAGATTGCTCTAAAATTGAAGGGAGTTGAATACAAATATGAGGAAGAAAAATGGGGGAACTTAAGTGATACACTAATCAAATACAATCCTGTTTATAAAAAAGTTCCTGTATTGGTTCACAAAGGAAACCCCATATCAGAATCACTTGTGATTCTTGAATATATTGATGAAACTTGGACACAAAATCCAATTTTGCCTTCTGATCCTTACAAAAGAGCCTTAGCTCGTTTCTGGTCCAAGTTCATAGATGATAAGTGTTTGAGTGTTGTACGAAAAGTTGTTTTCACAATTGATGAGAAAGAACGTGAGAAGAGTATTGAGGAAATGGAAGTAGCTTTTCAATTTCTTGAGAATGAGCTCAATGACAAATTCTTTGGTGGAGAGGATATTGGCATTGTTGACATTACTGCAGCCTTCATTGCTTTACATGAAGTAATGGGATTGAATTTGTTCACAAGTGAAAAATTTCCCAAACTTTATAAATGGAGCCAAGACTTCAACAACCACCCAATTGTCAAACAAAAATTGCCTCCTAAAGAAACTCTTTTGGCCTTCTACAAAGCTCGTTTAGAAAATCTTGTTGCTTCAAAATAG 660 0.3561 MASNQEEVKLFGLVESPYVTRVEIALKLKGVEYKYEEEKWGNLSDTLIKYNPVYKKVPVLVHKGNPISESLVILEYIDETWTQNPILPSDPYKRALARFWSKFIDDKCLSVVRKVVFTIDEKEREKSIEEMEVAFQFLENELNDKFFGGEDIGIVDITAAFIALHEVMGLNLFTSEKFPKLYKWSQDFNNHPIVKQKLPPKETLLAFYKARLENLVASK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01478 219 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Trre13g01478 219 Coils Coil 121 141 - -
Trre13g01478 219 CDD GST_N_Tau 8 81 - -
Trre13g01478 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Trre13g01478 219 Gene3D Glutaredoxin 1 89 - -
Trre13g01478 219 SFLD Main.3: Omega- and Tau-like 4 217 IPR045073 -
Trre13g01478 219 SUPERFAMILY GST C-terminal domain-like 79 214 IPR036282 -
Trre13g01478 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Trre13g01478 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 203 IPR045073 -
Trre13g01478 219 FunFam Tau class glutathione S-transferase 1 89 - -
Trre13g01478 219 SFLD Glutathione Transferase (cytosolic) 4 217 IPR040079 -
Trre13g01478 219 CDD GST_C_Tau 91 211 IPR045074 GO:0004364|GO:0006749
Trre13g01478 219 Gene3D - 90 219 - -
Trre13g01478 219 Pfam Glutathione S-transferase, C-terminal domain 111 192 IPR004046 -
Trre13g01478 219 FunFam Tau class glutathione S-transferase 87 218 - -
Trre13g01478 219 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01478 Trre-Chr13 11986202 11988217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01478 4 218 Glutathione S-transferase Gene Family AT3G09270 51.339 1.64e-71 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01478 K00799 - gmx:100527851 296.589