Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01465 ATGTGCTTACCATTGAGACCCTTGACAAGGTATTTGTATATGAGTAAATTGGTTACACTTCCTGGAACATCAGGTGCACTTTTGCGGCTTGTAATTGATCAGTTGCAGAAGGTAACTCACGAAGGTTGTGTCAACCGGGTACGCTCCATGACACAAAATCCCCACATATGTGCATCTTGGGCAGAATCTGATTATGTGCAGGCAGAGAAAATAGGATTGGAATATATGGATGTTGAAGCTTTGAGGAAGCTAAACAAAAATAAGAAACTGGTGAAGAAATTGGCAAAGAAGTACCATGCCTTTTTAGTTGTTTCCCACCAAGAATCTCTTGAGGCTAAGGATAATGAAACTAAGGCAATGGTCAAATTCCAACTTAAGAAAGTGATGTGCATGGGAGTAGCTGTTGGCAATGTGTGTTTTCTTGTACCTCTTGTGCTCGGTTGA 444 0.4099 MCLPLRPLTRYLYMSKLVTLPGTSGALLRLVIDQLQKVTHEGCVNRVRSMTQNPHICASWAESDYVQAEKIGLEYMDVEALRKLNKNKKLVKKLAKKYHAFLVVSHQESLEAKDNETKAMVKFQLKKVMCMGVAVGNVCFLVPLVLG 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01465 147 Gene3D - 53 104 IPR016095 -
Trre13g01465 147 SUPERFAMILY Ribosomal protein L1 51 139 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01465 Trre-Chr13 11859987 11865734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01465 56 139 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 57.798 3.31e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01465 K02865 - csv:101205570 97.8265