Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01464 ATGTGCTTACCATTGAGACCCTTGACAAGGTATTTGTATATGAGTAAATTGGTTACACTTCCTGGAACATCAGGTGCACTTTTGCGGCTTGTAATTGATCAGATAGCAGAGCTTCAGGTTTACACGTACTTGATGCACATATCTGTTCTTTACTCTATTGCAACAATGGATTGTGAGAGACTTAGACCAATGGGCTGTCATAGAGACTTTCCTTCTAACTTACTCATATCAGGAATCTCCCATGTGAAAAAATTGCAGAAGGTAACTCACGAAGGTTGTGTCAACCGGGTACGCTCCATGACACAAAATCCCCACATATGTGCATCTTGGGCAGAATCTGATTATGTGCAGGCAGAGAAAATAGGATTGGAATATATGGATGTTGAAGCTTTGAGGAAGCTAAACAAAAATAAGAAACTGGTGAAGAAATTGGCAAAGAAGTACCATGCCTTTTTAGTTGTTTCCCACCAAGAATCTCTTGAGGCTAAGGATAATGAAACTAAGGCAATGGTCAAATTCCAACTTAAGAAAGTGATGTGCATGGGAGTAGCTGTTGGCAATGTGTGTTTTCTTGTACCTCTTGTGCTCGGTTGA 594 0.404 MCLPLRPLTRYLYMSKLVTLPGTSGALLRLVIDQIAELQVYTYLMHISVLYSIATMDCERLRPMGCHRDFPSNLLISGISHVKKLQKVTHEGCVNRVRSMTQNPHICASWAESDYVQAEKIGLEYMDVEALRKLNKNKKLVKKLAKKYHAFLVVSHQESLEAKDNETKAMVKFQLKKVMCMGVAVGNVCFLVPLVLG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01464 197 Gene3D - 103 155 IPR016095 -
Trre13g01464 197 SUPERFAMILY Ribosomal protein L1 101 189 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01464 Trre-Chr13 11859987 11865734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01464 117 189 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 62.245 1.61e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01464 K02865 - gmx:100527698 97.8265