Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01404 ATGCAAATCAATCTTCAATTTCTGGCATCAGTTTTGGTGCTCCTTTTTGTCCCGGTTTTGTCCCAACTTGACCAGTTCATGTATGCAGGATTCAAGAATGTTGGTCACAACAATCTAACCTTGGATGGAATTGCAGTGATAGAGAAAAATGGAATAATAAGATTAACAAATGAAACAAGCAGATTAATCGGTCATGCTTTTTATTCTTTACCATTTCAGCTAAAGAACTCAACAACTGGTAAAGCTTTCTCCTTTTCTTCATGTTTTGCTCTTGCTGTTATTTCCGAGATTCCTAAATATGGTGGTCATGGCATGGCTTTCACAATAGCACCTACAAAAGATCTCAAAGGTTTACCTATTCAGTATCTTGGTCTTCTCAATTCAAGTAGTGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTTGACACCGTCAAAGACTTCGATTTTGGCGACATCAATGATAATCATGTTGGAATAGACATCAATACTTTGCAGTCGAATGCATCTGTTACTGCTGGTTATTACATTAATGATTCAATCAAACAAGATATTAATATCAAAAGTGGAAAACCAATTCTTGTTTGGGTTGATTATGATTCTTCAGTGAATCTTGTTAGTGTTACACTTTCTCTAACTTCAGTTAAACCCAAAAAACCAATCTTGTCCTTTCATGTGGATCTATCACCTATTCTTCATGATACTATGTATGTTGGATTCTCTGCATCGACCGGTATGCTTGCTAGCTCTCATTACTTATTGGGCTGGAGCTTTAAAATCAACGGTCCAGCACCACCTCTTGATTTGTCTTCACTACCAAAACCTCCACAACCGAAGAAGAAACACACGTCTTTGATAACTGGTATTTCACTTACAGTTTCTGTTATTGTATTATGTTCTGTTGCATTTGGAATTTACCTTTTCAGAAAAATCAAGAATGCTGATGTAATAGAAGCATGGGAGCTTGAAATTGGGCCCCATAGATACTCCTATAAAGAGCTCAAGAAAGCTACAAAAGGTTTTAAGGAGAAAGAGCTACTTGGACAGGGTGGTTTCGGAAGAGTTTACAAAGGGACGTTGCCGAAATCAAAGATCGAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGCTGAGGGAATTTGTGTCTGAAATCTCAAGCTTAGGACGGCTTTGCCACCGGAATTTGGTTAAGTTACTTGGTTGGTGTCGCCGCAGAGGCGACCTCTTACTTGTATACGATTTCATGGCTAATGGAAGCTTAGATAAGTACTTGTTTGAAGATTCAGAAATTGTGCTATGTTGGGAACAAAGGTTTAAGATAATAAAGGATGTCGCTTCAGGTCTTTTGTTTTTGCATGAAGGCTATGAACAAGTGGTAATACACAGAGATGTTAAGGCTAGTAATGTGCTGTTGGATTTTGAACTCAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTGTACGAACACGGTGCTAATCCCGGCACAACAAGAGTGGTGGGAACATTAGGCTATTTGGCACCGGAATTGCCTAGAACGGGAAAGGCATCTACAAGCTCTGACGTTTTTGCATTTGGCGCACTTCTACTCGAGGTTGCTTGCGGAAGAAGGCCTATTGAGCCAAATGCATTACAAGAAGAGTTGTTGTTGGTTGAATGGGTGTGGGAAAAGTATAAACAAGGAAGGTTACTTGAAGTAGTGGATCCTAAATTAAATGGTAGTTTTGATGAAATTGAGGTTATAATGGTGTTGAAATTGGGGATTATTTGTTCAAATGATGTGCCTACTTTAAGGCCTTGCATGAGACAAGTAGTGAGGATTTTGGATGGAGAAGTTGAGTTGCCAAATGAATTGAGAAAGCCAGGAGGTATTGATTCACAAGAGGGGTTTGATGAATTCTTGGATTCATTTGGAACTTCTAATTCATTTGATAAGACTAGTTCAAGCTCTTATCTTTGA 1971 0.3851 MQINLQFLASVLVLLFVPVLSQLDQFMYAGFKNVGHNNLTLDGIAVIEKNGIIRLTNETSRLIGHAFYSLPFQLKNSTTGKAFSFSSCFALAVISEIPKYGGHGMAFTIAPTKDLKGLPIQYLGLLNSSSVGNFSNHLFAVEFDTVKDFDFGDINDNHVGIDINTLQSNASVTAGYYINDSIKQDINIKSGKPILVWVDYDSSVNLVSVTLSLTSVKPKKPILSFHVDLSPILHDTMYVGFSASTGMLASSHYLLGWSFKINGPAPPLDLSSLPKPPQPKKKHTSLITGISLTVSVIVLCSVAFGIYLFRKIKNADVIEAWELEIGPHRYSYKELKKATKGFKEKELLGQGGFGRVYKGTLPKSKIEVAVKRVSHESKQGLREFVSEISSLGRLCHRNLVKLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSEIVLCWEQRFKIIKDVASGLLFLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGKASTSSDVFAFGALLLEVACGRRPIEPNALQEELLLVEWVWEKYKQGRLLEVVDPKLNGSFDEIEVIMVLKLGIICSNDVPTLRPCMRQVVRILDGEVELPNELRKPGGIDSQEGFDEFLDSFGTSNSFDKTSSSSYL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01404 656 ProSiteProfiles Protein kinase domain profile. 342 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g01404 656 SUPERFAMILY Protein kinase-like (PK-like) 324 616 IPR011009 -
Trre13g01404 656 Pfam Legume lectin domain 25 274 IPR001220 GO:0030246
Trre13g01404 656 Gene3D Transferase(Phosphotransferase) domain 1 419 625 - -
Trre13g01404 656 CDD STKc_IRAK 348 614 - -
Trre13g01404 656 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Trre13g01404 656 FunFam L-type lectin-domain containing receptor kinase S.4 22 267 - -
Trre13g01404 656 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Trre13g01404 656 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Trre13g01404 656 Gene3D - 23 262 - -
Trre13g01404 656 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Trre13g01404 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Trre13g01404 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 282 IPR013320 -
Trre13g01404 656 SMART serkin_6 342 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre13g01404 656 Pfam Protein tyrosine and serine/threonine kinase 344 550 IPR001245 GO:0004672|GO:0006468
Trre13g01404 656 PANTHER - 31 619 - -
Trre13g01404 656 FunFam L-type lectin-domain containing receptor kinase S.4 419 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01404 Trre-Chr13 11362754 11364724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01404 19 654 Receptor kinase-like Gene Family AT3G55550 58.168 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre13g01404 PK_Tyr_Ser-Thr 3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01404 - - gmx:100784346 976.081