Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01378 ATGGTTAAGTGTATAGACTCTGAGAGTTGTGATCTTGATAGTAGTAAAAGTGAATTATGGGCAGAATGTCACAGCAAACTCAATGTTGCTCTTTCGGTGATGCATGAATGTTTTGAGCCCCTAAAAGAATCCGCATCTTGTAGAAATATGGTAGACGATGTTATATTCAGCAGATGGCTGAAATTTGTAATAATCTATAGAACCTTGGAATTCACGTTCTTGCTCTTGATTTATAGTGATCCACGGTGCTTGTGTGTCTTATGGAAGAACTGA 273 0.3773 MVKCIDSESCDLDSSKSELWAECHSKLNVALSVMHECFEPLKESASCRNMVDDVIFSRWLKFVIIYRTLEFTFLLLIYSDPRCLCVLWKN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01378 90 PANTHER PHD FINGER PROTEIN 12 2 62 IPR042163 GO:0003714|GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01378 Trre-Chr13 11149560 11151980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01378 1 75 PHD Transcription Factor Family AT5G58610 44.000 3.28e-13 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01378 - - cam:101498411 95.9005