Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01364 ATGATTGAGTCATCCATGTCAAAGACAATGATGGTGAAAGTAATGACTTCTAATTGGTCAGAAGGGTCAGAACATCATGAACTTTTAAGGGACCTTTTAGTTGATGATTCTCCTTTACTTATGTTGCCACAAGGGACAGAAAATGAAGTAACCAACACAAGTTATGATGATTCTTCAAAAGACCAAATCGTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCACTTTCAACAACTTTCATCAACAAGAGTTTCCATATTGAAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATATAGGTGGAGGAAATATGGTCAAAAATTCATTAAAAATAGCCCAAATCCTAGGTAA 447 0.3356 MIESSMSKTMMVKVMTSNWSEGSEHHELLRDLLVDDSPLLMLPQGTENEVTNTSYDDSSKDQIVNRFISNIYSGPTISDIENALLVTNHSNHFQQLSSTRVSILKRSLSKIENKYTLKIKCFGNGMGDDGYRWRKYGQKFIKNSPNPR 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01364 148 Gene3D WRKY domain 123 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre13g01364 148 Pfam WRKY DNA -binding domain 128 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre13g01364 148 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 148 IPR044810 GO:0003700
Trre13g01364 148 ProSiteProfiles WRKY domain profile. 122 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre13g01364 148 SUPERFAMILY WRKY DNA-binding domain 125 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01364 Trre-Chr13 11028026 11028705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01364 29 148 WRKY Transcription Factor Family AT5G43290 47.967 8.44e-27 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre13g01364 WRKY 3.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01364 - - tpra:123889134 238.039