Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01354 ATGATTGAGTCATCCATGTCAAAGACAATGATGGAGAAAGTAATGACTTCTACTAATTGGTCAGAAGGGTCAGAACATCATGAACTTTTAACGGACCTTTTAGTTGATGAATCTCCTCTACTTATGTTGCCACAAGGGACAACAAATGAAGTAACCAACACAAGTCATGATGATTCTTCAAAAGACCAAATCTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCACTTTCAACAAATTTCATCAACAAGAGTTTCCATATTGGAAAGGAATTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATATAGGTGGAGGAAATATGGTCAAAAATTCATTAAAAATAGCCCAAATCCTAGGTAA 450 0.3356 MIESSMSKTMMEKVMTSTNWSEGSEHHELLTDLLVDESPLLMLPQGTTNEVTNTSHDDSSKDQIFNRFISNIYSGPTISDIENALLVTNHSNHFQQISSTRVSILERNLSKIENKYTLKIKCFGNGMGDDGYRWRKYGQKFIKNSPNPR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01354 149 Gene3D WRKY domain 124 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre13g01354 149 Pfam WRKY DNA -binding domain 129 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre13g01354 149 ProSiteProfiles WRKY domain profile. 123 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre13g01354 149 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 59 149 IPR044810 GO:0003700
Trre13g01354 149 SUPERFAMILY WRKY DNA-binding domain 126 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01354 Trre-Chr13 10984192 10984877 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01354 30 149 WRKY Transcription Factor Family AT5G43290 49.593 1.61e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre13g01354 WRKY 3.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01354 - - tpra:123889134 244.202