Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01325 ATGGCTAGAGGCTTTGCGGAATTACCATCTCAGAATCAGAGTCCTAATGAGTTAGTTTTGCAAGCTCTTAGAGATTTTATGTTTGAAAGGCATGGTGTACTAGAGGAAGGTTGGCAAGTGGAACTTAGACCATCAATGATCAGCTCTGACATTACTTTTTCACAATCTTCAATCAAACCAAACAACAAACCCAAACCCCCTTTCATACCAGCAAAGGATGACACAAAACCTGTTCTTCAAGACCCAATTCTGAGGTCTGATCCAATTGAGACAGAGGAAGCTACAATTGGGTTTTCATTTTTAGGGGTTTTAGCTCACTGGTTCTTGTTACTTGTTAACATAGTTGGCCTTGGATTGATTCTTGAAGAAATAGAGGGTTGA 381 0.399 MARGFAELPSQNQSPNELVLQALRDFMFERHGVLEEGWQVELRPSMISSDITFSQSSIKPNNKPKPPFIPAKDDTKPVLQDPILRSDPIETEEATIGFSFLGVLAHWFLLLVNIVGLGLILEEIEG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01325 126 PANTHER OS09G0446000 PROTEIN 45 95 - -
Trre13g01325 126 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01325 Trre-Chr13 10624505 10630946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01325 15 43 C2H2 Transcription Factor Family AT3G01460 68.966 7.78e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01325 - - tpra:123888014 73.9442