Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01322 ATGCCTCCGTTTCATATATCCAACAACCTTCGCCTTCGCAATTTTTTCATTTTATTCAGAAAACAGTTTGCATTCGTCGCATTCGCTTTGTTCCTTCTATTCTCTTTCGCTTTTCTCACTCGATCCAATAATCTTCACTCTCACTCCAATTCCATCCTCATTCCATTCACCCCTCTCACCAACTTCAAACAAATTGGCGCACTTTGTTTGGATGGCAGTTCTCCTGGTTACCATTTCCAAAACGGTTTTGGATCCGGATCTCATAATTGGCTGCTTCACGTCGAGGGAGGAGGGTGGTGCAATTCAATAGCGTCCTGTTCTTATAGAAAAATGACTGCTTTGGGATCATCCAAGTATATGGATACACCGGTTCCTTTTTCAGGGATTCTAAGCTCTGTTCCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGAAAGGAAGTGGGTTGTTCTTCAGAGGCCAAATCATATGGGAAGCTATTATGAATGAACTATTATCAATTGGAATGTCTAAAGCGAAACAGGCTCTGTTGTCAGGATGCTCTGCTGGAGGATTGGCAACTCTTATACATTGTGATAACTTCCGAAAATTACTCCCGAAGGAGGCCAATGTCAAGTGTCTTGCGGATGCAGGCTTCTTCCTTGATGAGAAGGATATTCTCGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTCCAGGGTGTTGAAAAAAGTTTGCACAAAGAGTGCCTTGCTAAAATGGAACCATCTAAGTGTCTCTTTCCATCAGAAATTCTGAAAAACATAAAGACTCCTGTTTTCCTTGTTCATCCAGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTCAAGGATCAGATCCCCATCGTCGCTGGAAAAGATGCAGATTGAACATTCACAATTGTGATGCTGACCTGATTGGTAAACTTGACAGTTTCCGTAGTTCTTTACTGAAGACTGTGAATGAATTCCAGCAACGAAAGGATATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTGGATGGGAGAGACATGGCATTCACCTACTTCTCCAAAAATAAAAGATAAGACAATTGCTGAATCTGTTGCCGATTGGTTCTTTCACCAACAAGTGGTAAATCTTATTGATTGCCCTTATCCATGTAATCCTACTTGCCATAATATGGATTTCAGCAGAGGATAA 1263 0.4093 MPPFHISNNLRLRNFFILFRKQFAFVAFALFLLFSFAFLTRSNNLHSHSNSILIPFTPLTNFKQIGALCLDGSSPGYHFQNGFGSGSHNWLLHVEGGGWCNSIASCSYRKMTALGSSKYMDTPVPFSGILSSVPSQNPDFFNWNKVKIRYCDGASFAGHPESEKGSGLFFRGQIIWEAIMNELLSIGMSKAKQALLSGCSAGGLATLIHCDNFRKLLPKEANVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVEKSLHKECLAKMEPSKCLFPSEILKNIKTPVFLVHPAYDFWQIHNILVPQGSDPHRRWKRCRLNIHNCDADLIGKLDSFRSSLLKTVNEFQQRKDIGMFIDSCFIHCQTWMGETWHSPTSPKIKDKTIAESVADWFFHQQVVNLIDCPYPCNPTCHNMDFSRG 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01322 420 PANTHER NOTUM-RELATED 53 415 IPR004963 GO:0016787
Trre13g01322 420 Pfam Pectinacetylesterase 49 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01322 Trre-Chr13 10605414 10609904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01322 39 384 Carbohydrate Esterase AT3G09410 63.506 2.20e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01322 K19882 - gmx:100792819 624.394