Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01321 ATGCCTCCGTTTCATATATCCAACAACCTTCGCCTTCGCAATTTTTTCATTTTATTCAGAAAACAGTTTGCATTCGTCGCATTCGCTTTGTTCCTTCTATTCTCTTTCGCTTTTCTCACTCGATCCAATAATCTTCACTCTCACTCCAATTCCATCCTCATTCCATTCACCCCTCTCACCAACTTCAAACAAATTGGCGCACTTTGTTTGGATGGCAGTTCTCCTGGTTACCATTTCCAAAACGGTTTTGGATCCGGATCTCATAATTGGCTGCTTCACGTCGAGGGAGGAGGGTGGTGCAATTCAATAGCGTCCTGTTCTTATAGAAAAATGACTGCTTTGGGATCATCCAAGTATATGGATACACCGGTTCCTTTTTCAGGGATTCTAAGCTCTGTTCCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGAAGAAAGGAAGTGGGTTGTTCTTCAGAGGCCAAATCATATGGGAAGCTATTATGAATGAACTATTATCAATTGGAATGTCTAAAGCGAAACAGGCTCTGTTGTCAGGATGCTCTGCTGGAGGATTGGCAACTCTTATACATTGTGATAACTTCCGAAAATTACTCCCGAAGGAGGCCAATGTCAAGTGTCTTGCGGATGCAGGCTTCTTCCTTGATGAGAAGGATATTCTCGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTCCAGGGTGTTGAAAAAAGTTTGCACAAAGAGTGCCTTGCTAAAATGGAACCATCTAAGTGTCTCTTTCCATCAGAAATTCTGAAAAACATAAAGACTCCTGTTTTCCTTGTTCATCCAGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTCAAGGATCAGATCCCCATCGTCGCTGGAAAAGATGCAGATTGAACATTCACAATTGTGATGCTGACCTGATTGGTAAACTTGACAGTTTCCGTAGTTCTTTACTGAAGACTGTGAATGAATTCCAGCAACGAAAGGATATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTGGATGGGAGAGACATGGCATTCACCTACTTCTCCAAAAATAAAAGATAAGACAATTGCTGAATCTGTTGCCGATTGGTTCTTTCACCAACAAGTGGTAAATCTTATTGATTGCCCTTATCCATGTAATCCTACTTGCCATAATATGGATTTCAGCAGAGGATAA 1266 0.4092 MPPFHISNNLRLRNFFILFRKQFAFVAFALFLLFSFAFLTRSNNLHSHSNSILIPFTPLTNFKQIGALCLDGSSPGYHFQNGFGSGSHNWLLHVEGGGWCNSIASCSYRKMTALGSSKYMDTPVPFSGILSSVPSQNPDFFNWNKVKIRYCDGASFAGHPESEKKGSGLFFRGQIIWEAIMNELLSIGMSKAKQALLSGCSAGGLATLIHCDNFRKLLPKEANVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVEKSLHKECLAKMEPSKCLFPSEILKNIKTPVFLVHPAYDFWQIHNILVPQGSDPHRRWKRCRLNIHNCDADLIGKLDSFRSSLLKTVNEFQQRKDIGMFIDSCFIHCQTWMGETWHSPTSPKIKDKTIAESVADWFFHQQVVNLIDCPYPCNPTCHNMDFSRG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01321 421 Pfam Pectinacetylesterase 49 398 IPR004963 GO:0016787
Trre13g01321 421 PANTHER NOTUM-RELATED 53 416 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01321 Trre-Chr13 10605414 10609904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01321 39 385 Carbohydrate Esterase AT3G09410 63.793 2.65e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01321 K19882 - gmx:100792819 629.402