Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01319 ATGCCTCCGTTTCATATATCCAACAACCTTCGCCTTCGCAATTTTTTCATTTTATTCAGAAAACAGTTTGCATTCGTCGCATTCGCTTTGTTCCTTCTATTCTCTTTCGCTTTTCTCACTCGATCCAATAATCTTCACTCTCACTCCAATTCCATCCTCATTCCATTCACCCCTCTCACCAACTTCAAACAAATTGGCGCACTTTGTTTGGATGGCAGTTCTCCTGGTTACCATTTCCAAAACGGTTTTGGATCCGGATCTCATAATTGGCTGCTTCACGTCGAGGGAGGAGGGTGGTGCAATTCAATAGCGTCCTGTTCTTATAGAAAAATGACTGCTTTGGGATCATCCAAGTATATGGATACACCGGTTCCTTTTTCAGGGATTCTAAGCTCTGTTCCTTCTCAAAATCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCCTTTGCTGGTCACCCAGAAAGTGAGGTTAGAAAAGGAAGTGGGTTGTTCTTCAGAGGCCAAATCATATGGGAAGCTATTATGAATGAACTATTATCAATTGGAATGTCTAAAGCGAAACAGGCTCTGTTGTCAGGATGCTCTGCTGGAGGATTGGCAACTCTTATACATTGTGATAACTTCCGAAAATTACTCCCGAAGGAGGCCAATGTCAAGTGTCTTGCGGATGCAGGCTTCTTCCTTGATGAGAAGGATATTCTCGGAAATAGCACAATGAGATCTTTCTATCATGATGTTGTCCAGCTCCAGGGTGTTGAAAAAAGTTTGCACAAAGAGTGCCTTGCTAAAATGGAACCATCTAAGTGTCTCTTTCCATCAGAAATTCTGAAAAACATAAAGACTCCTGTTTTCCTTGTTCATCCAGCTTATGATTTTTGGCAGATACACAATATTTTGGTACCTCAAGGATCAGATCCCCATCGTCGCTGGAAAAGATGCAGATTGAACATTCACAATTGTGATGCTGACCTGATTGGTAAACTTGACAGTTTCCGTAGTTCTTTACTGAAGACTGTGAATGAATTCCAGCAACGAAAGGATATTGGAATGTTTATAGATTCCTGCTTTATCCATTGCCAGACTTGGATGGGAGAGACATGGCATTCACCTACTTCTCCAAAAATAAAAGATAAGACAATTGCTGAATCTGTTGCCGATTGGTTCTTTCACCAACAAGTGGTAAATCTTATTGATTGCCCTTATCCATGTAATCCTACTTGCCATAATATGGATTTCAGCAGAGGATAA 1269 0.409 MPPFHISNNLRLRNFFILFRKQFAFVAFALFLLFSFAFLTRSNNLHSHSNSILIPFTPLTNFKQIGALCLDGSSPGYHFQNGFGSGSHNWLLHVEGGGWCNSIASCSYRKMTALGSSKYMDTPVPFSGILSSVPSQNPDFFNWNKVKIRYCDGASFAGHPESEVRKGSGLFFRGQIIWEAIMNELLSIGMSKAKQALLSGCSAGGLATLIHCDNFRKLLPKEANVKCLADAGFFLDEKDILGNSTMRSFYHDVVQLQGVEKSLHKECLAKMEPSKCLFPSEILKNIKTPVFLVHPAYDFWQIHNILVPQGSDPHRRWKRCRLNIHNCDADLIGKLDSFRSSLLKTVNEFQQRKDIGMFIDSCFIHCQTWMGETWHSPTSPKIKDKTIAESVADWFFHQQVVNLIDCPYPCNPTCHNMDFSRG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01319 422 Pfam Pectinacetylesterase 49 399 IPR004963 GO:0016787
Trre13g01319 422 PANTHER NOTUM-RELATED 53 417 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01319 Trre-Chr13 10605414 10609904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01319 39 386 Carbohydrate Esterase AT3G09410 63.506 1.89e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01319 K19882 - gmx:100792819 624.78