Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01300 ATGGCTTTTGTCACACAAGAGAAAACAAACTCACAACAACCCACCAACAAAAAGATCATCTTTTCAGATGCTGCCGCTTCCGTAAGAGGTTTAGGGTGCACTGTCGATACTTCTCAGCAGGTGTCGGAAACTATTCGTGCATCTGCAGATTGGCCTCATCAAGGGAACAAAACCAGAAAAAAAGGAAGAAGAAGAGAAACAACAAGAACAGTAGTAGTAGTAATGATGGTTCTTCTTCTGCTACTTATGTTGATTTTTCAAGATGTTTGGTGTGGATCTGGAATTGGATTCTCAGTAGATGTTGGTGCATCTGTTGGTTGTGTTGTGTCTAAAAAGAATGCCTCTTCAAGGGCTAATATTGTTCTGGACAAGATTACTCACAAAGGGTCTTCATTTTCATTCCGCTGCCGCAGTACTGTCCACCCAGAAACCTTTTCTTTTCCGTATACCTGTCCAGACTTTTTCACAACTTGCTTTTTTGGACCTGCAAAATACACTAGTCATATCAGAGATCTCTCTTCTGATGATTATTCTGAGATAATGACGCTTCAAGGAAATCAGTTTGAATCATTGCAAAATCAGAATGCAGATATAATGACTAAAGCTCTATCTAAGGGATAG 621 0.3977 MAFVTQEKTNSQQPTNKKIIFSDAAASVRGLGCTVDTSQQVSETIRASADWPHQGNKTRKKGRRRETTRTVVVVMMVLLLLLMLIFQDVWCGSGIGFSVDVGASVGCVVSKKNASSRANIVLDKITHKGSSFSFRCRSTVHPETFSFPYTCPDFFTTCFFGPAKYTSHIRDLSSDDYSEIMTLQGNQFESLQNQNADIMTKALSKG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01300 206 MobiDBLite consensus disorder prediction 46 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01300 Trre-Chr13 10469007 10469627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01300 23 184 C3H Transcription Factor Family AT1G73760 32.124 6.67e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01300 - - cam:101510167 153.295