Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01299 ATGAAGTTGTTAAAAGAACTGGTTGCAAATACACCGGTATCACTTTGTCAAAGGAGCAACTCAAATTTGCAGAAGAAAGAGTTAAAGATGCTGGCCTTTAGATTTACAGCAGCTGTGTGGTATGAAGTGTGTGGAATTGAGTTGAGTCCGCAAACGCTCTTTGCTATAGTTGCTGCCTTGGCTGTTCTTCCTACAGTTATGCTCTGTGACCTAAGCATTCTTAGTTACATCTCAGATGTTGGCTTTCAACGCTCAGGGACAACACTCAATCTTGCAACTCTTCCTATAGCTATTGGTCTTTACGGTTACTGTTATTCTGGACATGCCGTGTTCCCAAATATTTATACTTCCATGGCAAATCCAAACCAATTCCCTGCAGTACTAGTAGCATGTTTTGGAGTTTGTACCTTACTGTATGCTGGCGGTGCTTTTATGGGATACAAAATGTTTGGAGACGATACTCTCTCTCAATTCACTCTTAACCTGCCGCAAGACTTGGTTGCAACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAATATCCTTTATATGCATACATAGAGATGGAAAAAACTTATTCATCTTAA 597 0.4054 MKLLKELVANTPVSLCQRSNSNLQKKELKMLAFRFTAAVWYEVCGIELSPQTLFAIVAALAVLPTVMLCDLSILSYISDVGFQRSGTTLNLATLPIAIGLYGYCYSGHAVFPNIYTSMANPNQFPAVLVACFGVCTLLYAGGAFMGYKMFGDDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYPLYAYIEMEKTYSS 198
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01299 198 PANTHER OS05G0424000 PROTEIN-RELATED 44 192 - -
Trre13g01299 198 Pfam Transmembrane amino acid transporter protein 54 189 IPR013057 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre13g01299 Trre-Chr13 10463793 10466083 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01299 43 186 Amino Acid or Auxin Permease AAAP Family AT2G39130 64.848 1.38e-68 215
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01299 K15015 - gmx:100775840 228.409