Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01298 ATGAAGTTGTTAAAAGAACTGGTTGCAAATACACCGGTATCACTTTGTCAAAGGAGCAACTCAAATTTGCAGAAGAAAGAGTTAAAGATGCTGGCCTTTAGATTTACAGCAGCTGTGTGGTATGAAGTGTGTGGAATTGAGTTGAGTCCGCAAACGCTCTTTGCTATAGTTGCTGCCTTGGCTGTTCTTCCTACAGTTATGCTCTGTGACCTAAGCATTCTTAGTTACATCTCAGAAGATGTTGGCTTTCAACGCTCAGGGACAACACTCAATCTTGCAACTCTTCCTATAGCTATTGGTCTTTACGGTTACTGTTATTCTGGACATGCCGTGTTCCCAAATATTTATACTTCCATGGCAAATCCAAACCAATTCCCTGCAGTACTAGTAGCATGTTTTGGAGTTTGTACCTTACTGTATGCTGGCGGTGCTTTTATGGGATACAAAATGTTTGGAGACGATACTCTCTCTCAATTCACTCTTAACCTGCCGCAAGACTTGGTTGCAACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAATATCCTTTATATGCATACATAGAGATGGAAAAAACTTATTCATCTTAA 600 0.405 MKLLKELVANTPVSLCQRSNSNLQKKELKMLAFRFTAAVWYEVCGIELSPQTLFAIVAALAVLPTVMLCDLSILSYISEDVGFQRSGTTLNLATLPIAIGLYGYCYSGHAVFPNIYTSMANPNQFPAVLVACFGVCTLLYAGGAFMGYKMFGDDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYPLYAYIEMEKTYSS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01298 199 PANTHER OS05G0424000 PROTEIN-RELATED 48 193 - -
Trre13g01298 199 Pfam Transmembrane amino acid transporter protein 52 190 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01298 Trre-Chr13 10463793 10466083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01298 43 187 Amino Acid or Auxin Permease AAAP Family AT2G39130 64.848 4.23e-69 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01298 K15015 - gmx:100775840 230.72