Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01264 ATGGGAAAATATATGAAGAAATCCAAAATCGTCGGCGACGTCGCCGTAATCATGGAATCTCCATCACACGCTTCACCCGTCGGTGTACGGACAAGAGCAAAAACCCTCGCTCTCCAGAAATCACCGGTTTCCTCTCCGCAACATATGGACTCCTCTTCCTACCTCCAGCTTCGCAGTCGTCGCCTCCGTAAAGTCCCTCCGTCGCCGCAACCGAGAAAAGAGAATTCCTCTGCCGGAAATTCGAGACTTCGAGAATGTTCTGGTAAAACGTCTCCGTCTGTTGAAAAATTGGGAAGTTTCGGTGCTGAAGAGGAGAATGTTGATTTCACTGTAGAAGGTTCTTTTGGTGAAAATTTCTTAGAAATTGAAGGCAGAGATAGAAGCACCAGGGAAAGCACACCTTGCAGTTTAATAAGGGATTCAAATGTCATTCATACCCCTGGTTCAACGACAAGGCAAAGGACGCACAGAGTAATTCACGAAAACGTGCAAAGAAATATTCCAACATCTAGTGAAATGGATGAGTTCTTTGCCTTGGCAGAGAAGCAGCAACAAGCAAAATTTATGGAAAAGTACAATTTTGATGTAGTTAATGATGTACCTCTACCAGGACGTTATGAGTGGGTCCCTGTACTTGACTAG 642 0.4486 MGKYMKKSKIVGDVAVIMESPSHASPVGVRTRAKTLALQKSPVSSPQHMDSSSYLQLRSRRLRKVPPSPQPRKENSSAGNSRLRECSGKTSPSVEKLGSFGAEEENVDFTVEGSFGENFLEIEGRDRSTRESTPCSLIRDSNVIHTPGSTTRQRTHRVIHENVQRNIPTSSEMDEFFALAEKQQQAKFMEKYNFDVVNDVPLPGRYEWVPVLD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01264 213 MobiDBLite consensus disorder prediction 70 94 - -
Trre13g01264 213 MobiDBLite consensus disorder prediction 18 99 - -
Trre13g01264 213 Pfam Cyclin-dependent kinase inhibitor 165 211 IPR003175 GO:0004861|GO:0005634|GO:0051726
Trre13g01264 213 MobiDBLite consensus disorder prediction 37 58 - -
Trre13g01264 213 PIRSF CKI_KRP_plant 1 212 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre13g01264 213 Gene3D p27 151 213 IPR044898 -
Trre13g01264 213 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 211 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01264 Trre-Chr13 10076037 10079129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01264 1 211 Core Cell Cycle Gene Families AT5G48820 46.281 1.24e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01264 - - aprc:113863524 283.108