Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01145 ATGGGAAGGATTGAACTAGTTGAAAAGGTAGTGATTGCTCCTGAGCAACCAACACCAAGTAAGAAAATGTTCTTGTCAAATATTGACTTGTCCCTTGTTGTATACCAAGATTCTGCCTCTTTTTTTGATCCTCCAACGAACCAAATGTGTTTCTCTGAGATTTGTAGCAAATTATACAATGCACTTGCTAAAATGCTTGTACATTATGGTTTTATGGCCGGCCGGCTTGTGCCGAGTCTGGAAGAGAAAAATCGATTTGAAATTGATTGTAATGATGCCGGTATTGTTGTAGCTGCTGCGAGAACCGATAGAAAGTTGTGTGAATTTGGTGTTATTTCAGCACCTAATCCTGAATTAAAGGAATTGGTTGTTTTCTTGCTTAAAGATGGTGATGAAGAAATTGACCTTAAAGAAATTCCACTTGCTTCCTTGCAGCTTACACAATTTGGATGTGGAAGTTTAGCACTAGCTTCTCATTACAATCATTGCATACTCGACGGTATAGCAGTAAGAGAATTCGAGGCGAATTTGGCATCACTGACACGCGGTGACGACTTCATCATAGTACCTAATGCAGACAGAACACTACTGAGAGCTAGAAACCCACCAAAAATAAGTCATCCACATTTTGAATACTCAAAATCTACAAACACCGAAAATTTATTCACGATACGCGGAACAACTAGCACCAATGTTAAAAAAACATTTGTAGAGAATCAAATTCATGTGCTTCATTTATCACCACAAAAAATTGCAAGCTTAAAAAAGAAAGCTTTAGAGAACACAACATTAAAAAACATCACAACATTTCAAGTAGTTGCCGCAAAAATATGGAAAGCGAGAAGCATAGCGACAAAAATGACAGAGGAAAAAGTATCAACAATGTTGTTTCCGGTCGATGTTAGAAAAAAGGTTGTTCCGGAACTTCCAAACGGGTTTGCAGGCAATGCATTAGTTCCTGGTTTTGCAAGAGCAACTGTTAAGGAACTTATGGAAGTAGAAGATGATTTTATTATAAGGAAAGTGCAAGAAGGGATTGAAAGATTGAATGATGAGTATATTAAATCAGGTATAGATTGGTTAGAAGTGAATAGTGGTGTTCCTTGTAAGGAAGATAGTTTCTCTTTGGTGGCATGGTGGAGATTGGGATTAGAGAGTGAAATATTTGCTTGGGGTAGATTGAAATGTGCTACTCCACTTATAGTTAAGCCTGGTTTAGTTATGCTGTTGCCAGGGGCAAAGGATGAAGGGGGTATTAATATATGTTTGAGTTTACCTCAAGATCAATTGCAAGAGTTTTGTAGGATAATGCTAGAAACTTAG 1323 0.3757 MGRIELVEKVVIAPEQPTPSKKMFLSNIDLSLVVYQDSASFFDPPTNQMCFSEICSKLYNALAKMLVHYGFMAGRLVPSLEEKNRFEIDCNDAGIVVAAARTDRKLCEFGVISAPNPELKELVVFLLKDGDEEIDLKEIPLASLQLTQFGCGSLALASHYNHCILDGIAVREFEANLASLTRGDDFIIVPNADRTLLRARNPPKISHPHFEYSKSTNTENLFTIRGTTSTNVKKTFVENQIHVLHLSPQKIASLKKKALENTTLKNITTFQVVAAKIWKARSIATKMTEEKVSTMLFPVDVRKKVVPELPNGFAGNALVPGFARATVKELMEVEDDFIIRKVQEGIERLNDEYIKSGIDWLEVNSGVPCKEDSFSLVAWWRLGLESEIFAWGRLKCATPLIVKPGLVMLLPGAKDEGGINICLSLPQDQLQEFCRIMLET 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01145 440 Gene3D - 225 437 IPR023213 -
Trre13g01145 440 Pfam Transferase family 4 433 - -
Trre13g01145 440 Gene3D - 2 214 IPR023213 -
Trre13g01145 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01145 Trre-Chr13 9047228 9048889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01145 3 439 Monolignol Biosynthesis Gene Families AT5G48930 25.885 9.06e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01145 K15400 - gmx:100801822 721.85