Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01137 ATGGTGAGAGAACACAAACTCGATTCATTCTACACTAAACTCCGTCAATCCGCCCACTCATCCTCCACCACATCTCCCGTCCTCATCTTCCCTTCAACCTCCGACGTCGATTCACTCTGCGCTCTCAAAATCATTTTCAAAATCCTTCAATCCGATTCAATTCAATACGCATGTTACCCTGTTTCATCTTTTCGCGAAATTCACAATTACGCTAAACCTACAACCTCAGATTCTGATCCTATTTCAATTCTTTTAATTAATTGGGGTTCTCATAGAGATTTACGGAAAATTCTTAACCTAGGTCCAAACGCTACCGTTTTTGTAATTGATAGTCACCGTCCGATTCATCTTCATAATCTTAGTGACCAAAATGATAAAGTTGTTGTTCTTTTTACACAAGAAGATGAAAAACAAGCAGATCTAGCTTATGATTTTGAGTTTCCTTTAACTGCTCTTGCTAATGCTTCTACAACAATTGATTCCGATTCGGATTCTGGTGAATCTGATTCAGACTCCGATTCGGAGTCTGAATCAGAGTCTGAACGCGAAGACGAAGAAAAATCGAGAAAGAAAAGAAAGAGAAAGAGAAATTCAGAAGATGGCGAACCGGGAGAAGGAGGAGAAGAAGAAGAGAGGCAAGATCCGGTTAAGCTGTATAGAAAGAGGAAGAAAGAGTATTATCGATTGGGGACTTTTCACGGTAAGCCTTCGGGTTTTTTGATGTATGAACTTGCGCATTTTCTTAGGAAGAATACCGATGAATTGCTTTGGTTAGCGTGTGTTGCGTTAACCGATCAATTTGTTCATGAGAGGTTAAGTGATGAGAGGTATAGTGATGGTGTTATGGAGTTAGAGCAGTATATTAATAGTTCTGGTAATTTAGATGCTGTTAATTCAGTTACTTTGAAAGATGGAACAAAAATTAGGGCACCGAATTCGTCTAGGATTGCTTATGAGGATGAACCGAAACTGATGTTGTTGCAGGAGTGGAATTTGTTTGATTCCATGCTTTGTAGTTCATACATTGCGACGAAATTGAAGACGTGGAGTGATAATGGGATGAAGAAATTGAAGCTTTTGTTGGCTAGAATGGGATTTGCTCTTTCTGATTGTCAACAGAAGTTTCAGTATATGAATGTTGAGGTGAAACGGAAGATGAAACGCGAATTTGAGAAGTTTTTGCCGGAATATGGACTTACTGATTTTTATTATCGCGGTTTTTTGAGGATTCATGGTTATAGTTCAAAAGTTTCTGCTGCTGATGTTGTTTATGGTGTTACTGCGCTTTTGGAATCGTTTGTGAATTCGGACGGTTCTTGTGCTTCGATGCAGTTTAATGTGGCATTTGATGCGCTTTCTTTGAATAATGTTGATAAACTTAAAGCTGGGATGCAACAAGCTATAAAGGTTCAGAGAGCAATTTTGAGGCAGGGAAGTGTTGCGATTACGAAAAACGGTTACATTCGAAGTGGAAGGAAGTTTCGATGGGTAAAACTTGAGGATTCTGCGGAGTCGAGATTGTTAGGGTATCCTCAAGCTTTGACAAAGTTTTGTTATTTTCTAATGGATGCTTTGAGAGAAAAGGGTGCAAGGATGAAGCCTTTGATTTGTGCTTGTATGTCTCAGGAACCGAATAAAGTTCTTGTTGTTGGGGTTTGTGGGAGGCCGCGTTTGGCTGCTGCTCAAGGGAATGCATTTGGGGTTGCGTTTAGAAGTGCGGCTGAAGATGTTGACAGTGAGTTTTTCCATGAGTTGTTTGAGTCTTCTTGGATTGTGTTAGAATCTAAATCAGTTAATTCTTTCATGGTTAAGTTGACTGAGAAACTTTGA 1830 0.3951 MVREHKLDSFYTKLRQSAHSSSTTSPVLIFPSTSDVDSLCALKIIFKILQSDSIQYACYPVSSFREIHNYAKPTTSDSDPISILLINWGSHRDLRKILNLGPNATVFVIDSHRPIHLHNLSDQNDKVVVLFTQEDEKQADLAYDFEFPLTALANASTTIDSDSDSGESDSDSDSESESESEREDEEKSRKKRKRKRNSEDGEPGEGGEEEERQDPVKLYRKRKKEYYRLGTFHGKPSGFLMYELAHFLRKNTDELLWLACVALTDQFVHERLSDERYSDGVMELEQYINSSGNLDAVNSVTLKDGTKIRAPNSSRIAYEDEPKLMLLQEWNLFDSMLCSSYIATKLKTWSDNGMKKLKLLLARMGFALSDCQQKFQYMNVEVKRKMKREFEKFLPEYGLTDFYYRGFLRIHGYSSKVSAADVVYGVTALLESFVNSDGSCASMQFNVAFDALSLNNVDKLKAGMQQAIKVQRAILRQGSVAITKNGYIRSGRKFRWVKLEDSAESRLLGYPQALTKFCYFLMDALREKGARMKPLICACMSQEPNKVLVVGVCGRPRLAAAQGNAFGVAFRSAAEDVDSEFFHELFESSWIVLESKSVNSFMVKLTEKL 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01137 609 MobiDBLite consensus disorder prediction 182 202 - -
Trre13g01137 609 MobiDBLite consensus disorder prediction 164 181 - -
Trre13g01137 609 PANTHER CDC45-RELATED PROTEIN 1 608 IPR003874 GO:0006270
Trre13g01137 609 MobiDBLite consensus disorder prediction 156 216 - -
Trre13g01137 609 Pfam CDC45-like protein 27 608 IPR003874 GO:0006270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01137 Trre-Chr13 8965359 8967188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01137 1 609 Core DNA Replication Machinery Family AT3G25100 68.404 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01137 K06628 - cave:132187530 906.36