Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01099 ATGAGCATATCCATTGAAGTTGTGGTGGCTCTTGGAGCAGTATTGGTTGTATTGATCCATTTTTTGTATGTTTTTGTTTTGAGACCAAAATCACTAAGATCAAAGCTTCATAAGCAGGGTATTCATGGCCCTTCTCCTCACTTTTTCTTTGGTAATATCCTAGAAATAAAGACCCTTTTACTCCAACAACAAGAATCACAAGCCAAACACAAACAAGAAGAAGATGAAGATGTTTGTGTTTCTATATCTCATAACTGGACTTCAAATTTGTTACCTCATATTCACAAATGGAGAAAACAATATGGTCCCACACACTTATTTTCTTCCGGGAGTATACAATGGTTAACGGTGACAGATATGGAGTTGGTGAAGGAAATTATCCTAAACACATCTTTGAATCTAGGAAAACCTTCTTATCTTTCCAAAGATATGGGTCCACTACTAGGACAAGGTATAGTATCATCAAGTGGCTTGATTTGGGCTCATCAGAGAAAGATAATCGCGCCTGAATTCTACCCAGACAAAGTGAAGGCAATGATTGATCAAATAGTTGACTCCACAAATATAATGGTAAGATCATTGGAGAATAGAATAGAAAGAGACGGAGTAGTTTCAGAGATTAAAATCGATGAAGATCTGCGAAGCTTGTCTGCTGACATAATTGCTAGAGTTTGTTTTGGGAGCAATTATGTCGAAGGGAAAGAAATTTTCACAAAGCTTGGAGATCTTCTAAAACACCTCTCGAAGATATATCCTGGAATTCCGGGCCTTAGATACTTGCCAAACAAAAACAATAGGCAGATATGGAGATTAGAGAAAGAGATTAACTCAAATATATCAAAGCTCGTAAGACAGCGTCAAGAAGAAGGTCGTGAGCAAGATCTCTTGCAAATGATACTTGAGGGTGCAAAGAATTGTGATGGAAATGATGGCCTCTTATCAAATTCAATCTCACGAGACAGGTTCATTATAGATAATTGCAAAACTATATTCTTTGCTGGACATGATACTACTTCAATTACAGCATCGTGGTGCTTAATGTTGTTAGCTACATACCAAGATTGGCAAGATCGTGCTCGTGCAGAGGTGCTCGAAGTTTGCAGAAACGGTAATCCAGATGCAAGTATGCTTAAAAGCATGAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGCTTTATCCGCCAGCAGTATTTGTCACCAGAACAGCAATGCAAGATATTAGCATAAAAGGTATCGAACTTCCAAAAGGAATGAATATTCATATTCCAATCTCAATATTGCAACATGACATTGATCTCTGGGGGCCTGACGCCCACGAGTTCAATCCAGAAAGATTTGCGAATGGCGTGATTGGATCCTGCAAGATTCCACAAGCTTATATACCATTTGGAATAGGCCCCCATGTCTGTCCCGGACAGCATTTATCCATGATAGAATTGAAGGTGATTTTGTCTCTCATTCTGCCAAAGTTTCGCTTCTCTCTTTCACCTAGTTACTGTCATTCACCGGCCTATCGTTTGCTTATAGCGCCTGGTCAGGGAGTTGTTCTCAATATGACAAGAATTTAA 1572 0.3893 MSISIEVVVALGAVLVVLIHFLYVFVLRPKSLRSKLHKQGIHGPSPHFFFGNILEIKTLLLQQQESQAKHKQEEDEDVCVSISHNWTSNLLPHIHKWRKQYGPTHLFSSGSIQWLTVTDMELVKEIILNTSLNLGKPSYLSKDMGPLLGQGIVSSSGLIWAHQRKIIAPEFYPDKVKAMIDQIVDSTNIMVRSLENRIERDGVVSEIKIDEDLRSLSADIIARVCFGSNYVEGKEIFTKLGDLLKHLSKIYPGIPGLRYLPNKNNRQIWRLEKEINSNISKLVRQRQEEGREQDLLQMILEGAKNCDGNDGLLSNSISRDRFIIDNCKTIFFAGHDTTSITASWCLMLLATYQDWQDRARAEVLEVCRNGNPDASMLKSMKTLTMVIQETLRLYPPAVFVTRTAMQDISIKGIELPKGMNIHIPISILQHDIDLWGPDAHEFNPERFANGVIGSCKIPQAYIPFGIGPHVCPGQHLSMIELKVILSLILPKFRFSLSPSYCHSPAYRLLIAPGQGVVLNMTRI 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01099 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Trre13g01099 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 512 - -
Trre13g01099 523 SUPERFAMILY Cytochrome P450 85 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 Gene3D Cytochrome P450 23 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 Pfam Cytochrome P450 90 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS E-class P450 group I signature 98 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre13g01099 523 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01099 Trre-Chr13 8723347 8726683 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01099 122 520 Cytochrome P450 AT5G24900 46.098 1.39e-129 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01099 K24544 - gmx:100780335 772.696