Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre13g01091 ATGGCTGCAAATTTCTGGACATCATCACATTATAAGCATCTTCGGGATCAAGAAGAGGTGGATATGGTGAATCCACTTGACAAAGAAAAGGGTATCACACTTGAGGATTTTAAGCTTATCAAGATGCAAATGTCCAATTATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCTACTGCAGTTACATACATGAGGCGTGTTTACACAAGTAAGAGTATGGCAGAATATGATCCACGCCTTGTAGCTCCAGCCTGCTTGTACCTTGCATCAAAAGCAGAAGAAAGCACAGTGCAAGCTCGGCTACTTGTATTTTACATTAAGAAATTATACGCTGATGATAAGTATAGGTATGAAATCAAGGACATACTTGAAATGGAGATGAAGATTTTAGAAGCATTGAAGTATTACTTGGTTGTATTCCACCCCTACCGTTCCCTCTCCGGGTTGCTTCAGGATGCCGGTCTGAATGATCTAAGCATGACTCAACTAACTTGGGGGCTTGTTAATGACACATACAAGATGGACCTGATGCTTGTACATCCACCACATCAGATTGCTTTAGCTTGCATTTACATTGCTAGTGTACTCAGGGAGAAAGACACCACTGTCTGGTATGAAGAACTTCGTGTTGATATGAATGTGATTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAACAACAGAATGTTCACTGATGAGAGAATCAATGCTGCTCTCCAGAAGCTATGA 750 0.3973 MAANFWTSSHYKHLRDQEEVDMVNPLDKEKGITLEDFKLIKMQMSNYILKLAQQVKVRQRVVATAVTYMRRVYTSKSMAEYDPRLVAPACLYLASKAEESTVQARLLVFYIKKLYADDKYRYEIKDILEMEMKILEALKYYLVVFHPYRSLSGLLQDAGLNDLSMTQLTWGLVNDTYKMDLMLVHPPHQIALACIYIASVLREKDTTVWYEELRVDMNVIKNISMEILDFYENNRMFTDERINAALQKL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre13g01091 249 Gene3D - 7 240 - -
Trre13g01091 249 SMART cyclin_7 46 136 IPR013763 -
Trre13g01091 249 SMART cyclin_7 149 229 IPR013763 -
Trre13g01091 249 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Trre13g01091 249 PIRSF Cyclin_C_H_G 1 249 - -
Trre13g01091 249 PANTHER CYCLIN 18 234 IPR043198 GO:0006357|GO:0016538
Trre13g01091 249 Gene3D - 19 143 - -
Trre13g01091 249 SUPERFAMILY Cyclin-like 146 241 IPR036915 -
Trre13g01091 249 SUPERFAMILY Cyclin-like 4 144 IPR036915 -
Trre13g01091 249 Pfam Cyclin, N-terminal domain 25 142 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre13g01091 Trre-Chr13 8685992 8696683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre13g01091 59 199 Core Cell Cycle Gene Families AT5G27620 29.801 1.14e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre13g01091 K15161 - gmx:100784345 444.891